Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22l18
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 8.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 8.4
>Z11115-2|CAA77450.1| 599|Caenorhabditis elegans Hypothetical
protein ZK637.3 protein.
Length = 599
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Frame = +1
Query: 280 GIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPSEFTCNFS----------DI 429
G + AFGDFN+D TD V N + + L S+FT S D
Sbjct: 29 GKVCAFGDFNADRNTDILVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADF 88
Query: 430 VITSIVPGDYDGDAYMDILLTTQN 501
V S+ GD++GD+ +D+L++ ++
Sbjct: 89 VECSV--GDFNGDSRLDVLVSIRD 110
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2189 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2282 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2095 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2282 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2189 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2221
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2282 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2095 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2127
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2282 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2314
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 737 FSSPIGSSLGLLRDWSKIQNTRLPSTLIPNKSKI 636
F+ PI S G DW+ +N LPS +PN +KI
Sbjct: 2281 FTCPIYSVPGSKVDWT-YENGDLPSKAVPNGNKI 2313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,726,923
Number of Sequences: 27780
Number of extensions: 385236
Number of successful extensions: 1004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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