Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22k22
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016004-1|AAV36889.1|  113|Drosophila melanogaster RE39106p pro...   144   6e-35
AE014297-2204|AAF55312.1|  113|Drosophila melanogaster CG10406-P...   144   6e-35
AE014298-914|AAF46176.1|  438|Drosophila melanogaster CG14443-PA...    29   4.5  

>BT016004-1|AAV36889.1|  113|Drosophila melanogaster RE39106p
           protein.
          Length = 113

 Score =  144 bits (350), Expect = 6e-35
 Identities = 67/96 (69%), Positives = 76/96 (79%)
 Frame = +3

Query: 174 KYAQLIXASTTYARRMKRLSNRIFGEVALPXNSKSMKVVKIFSARPLHTNEEIIXYYPRX 353
           KY +LI   T YARRM  LSNRIFGEVA   N KSMKVV++FS  P+H  + +I +YPR 
Sbjct: 4   KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63

Query: 354 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 461
           +ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 64  VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99


>AE014297-2204|AAF55312.1|  113|Drosophila melanogaster CG10406-PA
           protein.
          Length = 113

 Score =  144 bits (350), Expect = 6e-35
 Identities = 67/96 (69%), Positives = 76/96 (79%)
 Frame = +3

Query: 174 KYAQLIXASTTYARRMKRLSNRIFGEVALPXNSKSMKVVKIFSARPLHTNEEIIXYYPRX 353
           KY +LI   T YARRM  LSNRIFGEVA   N KSMKVV++FS  P+H  + +I +YPR 
Sbjct: 4   KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63

Query: 354 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 461
           +ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 64  VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99


>AE014298-914|AAF46176.1|  438|Drosophila melanogaster CG14443-PA
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = +3

Query: 177 YAQLIXASTTYARRMKRLSNRIFGE 251
           +AQLI +ST+++  +KR++N+  G+
Sbjct: 208 HAQLIVSSTSWSSNLKRMANKFLGQ 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,575,526
Number of Sequences: 53049
Number of extensions: 288468
Number of successful extensions: 717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)