Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22k01
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 178 2e-44
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 178 2e-44
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 178 2e-44
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 36 0.13
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 36 0.13
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 35 0.31
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 35 0.31
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 35 0.31
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 35 0.31
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 35 0.41
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 35 0.41
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 35 0.41
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 34 0.72
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 34 0.72
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 34 0.72
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 34 0.72
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 34 0.72
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 34 0.72
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 34 0.72
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 34 0.72
AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein. 34 0.72
AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein. 34 0.72
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 34 0.72
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 33 0.95
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 1.3
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 1.3
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 33 1.3
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 33 1.3
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 32 2.2
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 32 2.2
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 32 2.2
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 32 2.2
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 32 2.2
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 32 2.2
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 32 2.2
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 32 2.2
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 32 2.2
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 32 2.2
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 32 2.2
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 31 3.8
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 31 3.8
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 31 5.1
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 31 5.1
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 31 5.1
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 31 5.1
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 31 5.1
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 31 5.1
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 31 5.1
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 31 5.1
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 31 5.1
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 31 6.7
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 31 6.7
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 31 6.7
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 31 6.7
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 31 6.7
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 31 6.7
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 31 6.7
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 31 6.7
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 31 6.7
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 30 8.8
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 30 8.8
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 8.8
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 30 8.8
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 8.8
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 30 8.8
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 30 8.8
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 30 8.8
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 30 8.8
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 8.8
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 8.8
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.8
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.8
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 30 8.8
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 30 8.8
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 30 8.8
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 30 8.8
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.8
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 30 8.8
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 30 8.8
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 178 bits (434), Expect = 2e-44
Identities = 99/235 (42%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Frame = +2
Query: 170 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 349
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 350 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 529
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 530 FKHT----------QI-----XXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 655
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 656 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R +D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +2
Query: 617 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 797 HCKGFAYV 820
H KGFAY+
Sbjct: 211 HPKGFAYI 218
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +2
Query: 617 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 797 HCKGFAYV 820
H KGFAY+
Sbjct: 211 HPKGFAYI 218
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 602 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 781
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 782 EKSTGHCKGFAYVH 823
++ TG +GFA+V+
Sbjct: 153 DQRTGRSRGFAFVY 166
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 602 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 781
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 782 EKSTGHCKGFAYVH 823
++ TG +GFA+V+
Sbjct: 153 DQRTGRSRGFAFVY 166
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 602 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 781
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 782 EKSTGHCKGFAYVH 823
++ TG +GFA+V+
Sbjct: 153 DQRTGRSRGFAFVY 166
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 602 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 781
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 782 EKSTGHCKGFAYVH 823
++ TG +GFA+V+
Sbjct: 153 DQRTGRSRGFAFVY 166
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 817
I L N+ + + +L+ FGP+ L K+ +TG KG+A+
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF 304
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 817
I L N+ + + +L+ FGP+ L K+ +TG KG+A+
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF 304
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 817
I L N+ + + +L+ FGP+ L K+ +TG KG+A+
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF 304
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 26 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 84
Query: 806 GFAYV 820
GF YV
Sbjct: 85 GFCYV 89
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 632 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 811
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 812 AYV 820
A++
Sbjct: 446 AFI 448
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 632 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 811
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 812 AYV 820
A++
Sbjct: 446 AFI 448
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 626 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 805
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 806 GFAYV 820
GF YV
Sbjct: 83 GFCYV 87
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.72
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 632 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 811
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 399 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 458
Query: 812 AYV 820
A++
Sbjct: 459 AFI 461
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 33.5 bits (73), Expect = 0.95
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
I+N+ + ++LV+ +G + + +L + TGH KG+ +V
Sbjct: 172 ITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFV 214
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 665 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFV 91
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 665 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFV 91
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 665 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFV 91
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 665 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFV 91
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 103
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 118
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 118
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 103
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 650 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLV 119
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
+ L A +++L GPV + ++ EK + C+GF YV
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYV 50
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
+ L A +++L GPV + ++ EK + C+GF YV
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYV 50
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 719 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
E D+ + FG V + + K+ TGH KGF +V
Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 187 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 246
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 247 KHKGYGFI 254
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 265 KHKGYGFI 272
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 222 KHKGYGFI 229
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 222 KHKGYGFI 229
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 145 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 204
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 205 KHKGYGFI 212
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 248 KHKGYGFI 255
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 248 KHKGYGFI 255
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 202 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 261
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 262 KHKGYGFI 269
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 620 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 796
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 797 HCKGFAYV 820
KG+ ++
Sbjct: 265 KHKGYGFI 272
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 689 RISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAY 817
R+ N+ A E + D+ GPV L ++ TG KG+ +
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 52
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 159 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 218
>U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 538 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 419
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
>L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 538 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 419
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 78 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 137
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 81 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 140
>BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 538 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 419
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein.
Length = 477
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 538 VLEWTI-QCQMVSLTCTTLKDNIAGWWLKTIKLPVIWALTL 419
V+ W + +C ++ C T DN+ WW+ ++ PV A+ +
Sbjct: 279 VVPWAVVKCLFENVQCWTSNDNMGFWWI--LRFPVFLAILI 317
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 692 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
+ L A + +L GPV + ++ EK + C+GF YV
Sbjct: 8 VGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGSKACRGFGYV 50
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 161 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 220
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 641 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 820
P R + +E V I + LS E I + GFG V + L + T +GF ++
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,231,010
Number of Sequences: 237096
Number of extensions: 2172051
Number of successful extensions: 5788
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 5451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5780
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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