Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22j20
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p pro...    30   2.7  
AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    30   2.7  
AE014297-4061|AAF56659.1|  596|Drosophila melanogaster CG14257-P...    29   4.8  

>BT003578-1|AAO39582.1|  739|Drosophila melanogaster LD24631p
           protein.
          Length = 739

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 292 EQSFTSFVVPERRPSENTRRLEEDGAVSQNRP--EGDREQWALKKHRD 429
           EQ+       +++PSEN    +EDG     RP  +GD E+   +K +D
Sbjct: 77  EQANDEKASEDKKPSENNDEEDEDGPSPNKRPKTDGDSEKAESEKEKD 124


>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 292 EQSFTSFVVPERRPSENTRRLEEDGAVSQNRP--EGDREQWALKKHRD 429
           EQ+       +++PSEN    +EDG     RP  +GD E+   +K +D
Sbjct: 610 EQANDEKASEDKKPSENNDEEDEDGPSPNKRPKTDGDSEKAESEKEKD 657


>AE014297-4061|AAF56659.1|  596|Drosophila melanogaster CG14257-PA
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 483 GPHHHRLEAALCLVPRCLANSGLTSQPSPLVGGPSSRSEHGYCNDRDKA 629
           G   H+  +A   VP  LA +   +  S L   P ++SEHG CN+  +A
Sbjct: 220 GSSGHKTVSAPGPVPH-LAKTEEATPSSDLAADPMAKSEHGACNEPGQA 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,885,930
Number of Sequences: 53049
Number of extensions: 900371
Number of successful extensions: 2566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2565
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)