Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22j17
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 142 2e-34
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 41 0.001
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 40 0.003
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.22
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 33 0.22
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 33 0.29
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 33 0.29
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 32 0.38
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.88
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 31 0.88
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 30 1.5
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 30 1.5
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 30 1.5
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 30 1.5
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 30 1.5
AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical... 30 2.0
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 2.7
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 2.7
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 4.7
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 6.2
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 28 8.2
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 142 bits (345), Expect = 2e-34
Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +1
Query: 139 MKFNYKFQNLLGTVYRKGDVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTA 318
M N+K N +GTVYR G V FSKDG VISP+GN+++I++L+ N S TL + +YN
Sbjct: 1 MDTNFKLSNCIGTVYRDGQVAFSKDGYSVISPIGNKLSIFDLRNNTSKTLDIDCNYNIKR 60
Query: 319 VDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVF 498
+ I+P+G LLA E+G + L + ++ ++ + + ++++SPD A+C +N +
Sbjct: 61 LSISPSGYHLLASDERGVVHFVHLLSEFKIYTFRSNKPIGSLQWSPDATRVAICRENDLQ 120
Query: 499 VMTAPVHFTGE-YRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN 675
+ + Y PF + R +K + D + +DWS + LL G +D ++ + +N
Sbjct: 121 IHEFGKSIENKVYNPFSLSRTYKLSSDSLKTIDWSDDANLLVSGGEDRVVRVVGAKDFKN 180
Query: 676 ITMYSLSGHTDKIIGVFFERKSLDLI 753
+ ++ L+ H I+ F + S D+I
Sbjct: 181 LFIHPLASHKGYIVNCQFMKNSYDMI 206
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 603
Q VN V FSPD +Y A D +V + TG+Y + V V + WS+
Sbjct: 361 QLVNQVVFSPDTRYIASASFDKSVKLWCGR---TGKYLASLRGHV-----GPVYQVAWSA 412
Query: 604 CSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGV 723
SRLL GS D+T K+ E Y L GH D++ V
Sbjct: 413 DSRLLVSGSADSTLKV--FELKTKSLYYDLPGHGDEVFTV 450
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
+F + VK+SP FAV + + + ++ E ++ K++ K VTCLDW
Sbjct: 100 RFNRAATYVKWSPLENKFAV---GSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDW 156
Query: 598 SSCSRLLAVGSKDTTTKIHTVEYLENI 678
S + LLAVGS D ++ + Y++ +
Sbjct: 157 HSNNVLLAVGSCDFKCRVFSA-YVKEV 182
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSC 606
+ + + F+P FA D+ TA V ++ + +RV + EV C+DW
Sbjct: 218 EAIRGLAFAPTDVKFATASDDG----TARVW---DFARYTEERVLRGHGAEVRCIDWHPT 270
Query: 607 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFER 735
L+A GS+DT + + + +L H ++ V F +
Sbjct: 271 KGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNK 313
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/129 (25%), Positives = 55/129 (42%)
Frame = +1
Query: 355 VTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEY 534
+T+K E SL ++ H + V+ +KFS GKY + + V T
Sbjct: 194 ITKKPENGEFSLVKTISGHT----KSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMT--- 246
Query: 535 RPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKI 714
++ + L + WSS S+ +A S DTT KI V + + ++ GHT+ +
Sbjct: 247 ---YLQTLASHQLG-INDFSWSSNSQFIASASDDTTVKIFDV--ISGACLRTMRGHTNYV 300
Query: 715 IGVFFERKS 741
F +S
Sbjct: 301 FCCSFNPQS 309
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Frame = +1
Query: 256 YNLKQNKSNTLSFESHYNYTAVDI--APNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQ 429
Y+L+ + + ES + Y+ D+ +P G L++ + A ++ + L +YK ++
Sbjct: 173 YDLRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSER 232
Query: 430 QVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRV-------FKKALDEVTC 588
VN+ SP+ + + +T G + I V FK +
Sbjct: 233 PVNSACISPNRDHICLGGGEDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINT 292
Query: 589 LDWSSCSRLLAVGSKDTTTKI 651
+ W ++A G +D +I
Sbjct: 293 MAWHPSGTIIATGGEDGYIRI 313
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 32.7 bits (71), Expect = 0.29
Identities = 33/138 (23%), Positives = 56/138 (40%)
Frame = +1
Query: 316 AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTV 495
+V+ +P+ L++ ++ S+ T Y+ V +F G YFA +
Sbjct: 399 SVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPAVVWQAQFCSRGYYFATASADK- 457
Query: 496 FVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN 675
TA + T P R+F +V C+D+ +A GS D ++ V
Sbjct: 458 ---TAAMWSTDRMHPL---RIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTR 511
Query: 676 ITMYSLSGHTDKIIGVFF 729
+ ++ SGH II V F
Sbjct: 512 VRIF--SGHKASIIAVKF 527
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 32.7 bits (71), Expect = 0.29
Identities = 33/138 (23%), Positives = 56/138 (40%)
Frame = +1
Query: 316 AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTV 495
+V+ +P+ L++ ++ S+ T Y+ V +F G YFA +
Sbjct: 399 SVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPAVVWQAQFCSRGYYFATASADK- 457
Query: 496 FVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN 675
TA + T P R+F +V C+D+ +A GS D ++ V
Sbjct: 458 ---TAAMWSTDRMHPL---RIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTR 511
Query: 676 ITMYSLSGHTDKIIGVFF 729
+ ++ SGH II V F
Sbjct: 512 VRIF--SGHKASIIAVKF 527
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 550 KRVFKKALDEVTCLDW-SSCSRLLAVGSKDTTTKIHTVEYLEN 675
K VFK TCLDW ++ +L GS+D T K + + +N
Sbjct: 137 KSVFKSHERSATCLDWHATTPYILVSGSRDCTVKSYDMRVKDN 179
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.88
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.88
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.88
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAV-CCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 603
+ +++ KFSP GKY D TV + H I +R V + WSS
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMD-H-------MICERTLTGHKLGVNDIAWSS 139
Query: 604 CSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKS 741
SR + S D T KI E + + +L GH + + F +S
Sbjct: 140 DSRCVVSASDDKTLKI--FEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 304 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 405
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 326 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 359
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 304 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 405
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 614 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 647
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 351 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 410
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 411 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 440
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 617 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 676
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 677 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 617 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 676
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 677 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical
protein Y38H6C.11 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Frame = +1
Query: 658 VEYLENITMYSLSGHT-DKI-IGVFFER-KSLDL 750
+EYLE ITM SLSG DK+ I F+R KSLDL
Sbjct: 188 MEYLEKITMKSLSGKVFDKLKITDHFKRAKSLDL 221
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Frame = +1
Query: 247 ITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKF 423
+ ++NL + T + H Y V ++P+G + + G+A + L L+
Sbjct: 180 VKVWNLGNCRLKT-NHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPG 238
Query: 424 KQQVNAVKFSPDGKYFAVCCDNTVFVM-TAPVHFTGEYRPFIMKRVFKK-ALDEVTCLDW 597
+NA+ FSP+ + +++ + E +P I + + + L W
Sbjct: 239 NDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAW 298
Query: 598 SSCSRLLAVGSKDTTTKIHTV 660
S + L G D +++ V
Sbjct: 299 SQDGQTLFAGYTDNIIRVYQV 319
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 340 MTLLAVTEKGEAQIISLTTSVVLHKYKFK---QQVNAVKFSPDGKYFAVCCDNTVFV 501
+ L+A+ E G+ +I + T F+ +VNA+ FS DGK+ V DN ++
Sbjct: 525 VALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLV-ADNDSYI 580
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 595 WSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKI 714
WS C R + GS D ++ E L +Y L GH +
Sbjct: 265 WSPCERFITAGSSDRF--LYVWETLSKKIVYKLPGHMGSV 302
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 661 RRCESSLSCLSIRPPGVSSRTTSPDTS 581
R C+SSL + +PPG SS + P +S
Sbjct: 92 RECKSSLMMIGPQPPGPSSGMSMPSSS 118
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 540 LHHETCLQESPRRSDVSGLVVLLETPGGRIERHDNEDSHRRIFREH 677
LHHE+CL+ R SDV +++ET + E++D ++ + +EH
Sbjct: 628 LHHESCLR--MRISDVDHNSLVIETERLQSEKNDLKEK-AAVIKEH 670
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 540 LHHETCLQESPRRSDVSGLVVLLETPGGRIERHDNEDSHRRIFREH 677
LHHE+CL+ R SDV +++ET + E++D ++ + +EH
Sbjct: 628 LHHESCLR--MRISDVDHNSLVIETERLQSEKNDLKEK-AAVIKEH 670
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 27.9 bits (59), Expect = 8.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
K V+A+ FSPDG++ A + + V TG+ R + K A +++ L W
Sbjct: 70 KLDSSVSALHFSPDGRFLAAATSKGI-IHLLDVE-TGKVRFSV-----KAASEKIAKLHW 122
Query: 598 SSCSRLLAVGS-KDTTTKIHTVEYLE 672
+ + + + TT+I VE +E
Sbjct: 123 NCVREKPFISNLGEFTTRIKNVEAIE 148
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 27.9 bits (59), Expect = 8.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
K V+A+ FSPDG++ A + + V TG+ R + K A +++ L W
Sbjct: 70 KLDSSVSALHFSPDGRFLAAATSKGI-IHLLDVE-TGKVRFSV-----KAASEKIAKLHW 122
Query: 598 SSCSRLLAVGS-KDTTTKIHTVEYLE 672
+ + + + TT+I VE +E
Sbjct: 123 NCVREKPFISNLGEFTTRIKNVEAIE 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,505,341
Number of Sequences: 27780
Number of extensions: 377709
Number of successful extensions: 1039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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