Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22j01
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.36
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 31 0.64
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 30 1.5
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 2.6
U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.4
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 29 4.5
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 5.9
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 5.9
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical... 28 5.9
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 28 5.9
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 5.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 5.9
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 5.9
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 5.9
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 28 5.9
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +3
Query: 474 PPLHPLASLLAVSPLCI----KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY* 641
P +P+ ++ +SP P+P + T+T +NP TPTT TS N ++P+
Sbjct: 467 PTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHL 525
Query: 642 KEFAPGLKPPLSSEAPSAYLTPSS 713
+ + AP +P++
Sbjct: 526 STITGSIVTSTPTMAPQTSASPTT 549
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3
Query: 474 PPLHPLASLLAVSPLCI----KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP-- 635
P +P+ ++ +SP P+P + T+T +NP TPTT + +I +P P
Sbjct: 467 PTFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPAN 524
Query: 636 Y*KEFAPGLKPPLSSEAPSAYLTPSS 713
+ P S+ AP+A + P+S
Sbjct: 525 LTTPTTAPVNPTSSTTAPTAPVNPTS 550
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 496 HYWRSRPYASSHPPLRSRLHQPDHQIPDS 582
H+ P +S HPPL S H +H PD+
Sbjct: 60 HFDDQLPTSSHHPPLNSSSHHSNHNYPDT 88
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 447 SQLKEAMCWPPLHPLASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINP 626
S L + + PPL P++ LL +SPL + P + ++T S P TP + + + +
Sbjct: 443 SILPQHLRTPPLVPISQLLIISPLVLPPYHNFTTGSATVS--PFASTPANMTIFNFTSDS 500
Query: 627 LTPY*KEFAPGLKPPLSSEAPSAY 698
T Y + P +++ +Y
Sbjct: 501 STTYSNSTTAQVFPDVANTPDLSY 524
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 352
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical
protein C34D4.10 protein.
Length = 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 480 LHPLASLLAVSPLCIKPPSPAISATSTRSSN 572
L PL A++P+CI+P P IS+ + +N
Sbjct: 234 LDPLLDYPALAPICIRPEVPRISSDAEHVTN 264
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 507 VSPLCIKPP-SPAISATSTRSSNPRFHTPTTPDLTSISI 620
VS C++PP +P + ++T ++ P+ T +T TS +I
Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAI 1183
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = +3
Query: 474 PPLHPLASLLAVSPLCIKPPSPAISATSTRSSNPRFHT--PTTPDLTSISINPLTPY*KE 647
PP +P A V+P PP+ + ++ P + T PT P S P P
Sbjct: 233 PPSYPTAKKYPVAPTYQMPPNDYAQKPAYSTAPPTYPTEAPTYPTTASYETTPSYPE-PS 291
Query: 648 FAPGLKPPLS---SEAPSAYLTPSSL 716
+ K P++ PS TPS L
Sbjct: 292 YQVSKKYPIAPTYETTPSYETTPSYL 317
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 525 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 632
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 495 MREDEGVASTLPPSTVTSAVVQQRSTVTGILRLGAE 388
+ ++ GV +PP VT+ V+ G+LR+ AE
Sbjct: 233 LTQNNGVKINIPPPHVTNEVISVTGEKDGVLRVAAE 268
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 692
P+ S ++ + P T TP+LT++++ P+T K + P +++ P+
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 522 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 635
+ SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 474 PPLHPLASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSI 614
PP+ P S + SP P+P +S+T R S P F + + L+ I
Sbjct: 145 PPVPPRHSRVQQSPPVPIHPTPPVSSTPLRHSAPSFASDSQQFLSPI 191
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 474 PPLHPLASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSI 614
PP+ P S + SP P+P +S+T R S P F + + L+ I
Sbjct: 145 PPVPPRHSRVQQSPPVPIHPTPPVSSTPLRHSAPSFASDSQQFLSPI 191
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 492 ASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTT 596
A L+ + ++PPSPA+SA S R R+H PT+
Sbjct: 259 ADLVRGVHISMQPPSPAVSAFSPR----RYHHPTS 289
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 492 ASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTT 596
A L+ + ++PPSPA+SA S R R+H PT+
Sbjct: 259 ADLVRGVHISMQPPSPAVSAFSPR----RYHHPTS 289
>AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical
protein Y56A3A.21 protein.
Length = 159
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 489 LASLLAVSPLCIKPPSPAISATSTRSSNPRFHTPTT 596
+A L S LC K SP SA+S +++ FH TT
Sbjct: 6 VALCLVASALCAKCESPKYSASSFSTTDGFFHYKTT 41
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 522 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFA-PGLKPPLSSEAP 689
+ PP PA +A + + P + + ++NP TP + P PPLSS P
Sbjct: 166 VPPPPPAATAAVSMNGGGPGSAPGSAHSVNNNVNPGTPGSNPLSNPMSNPPLSSGPP 222
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 493 HHYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H 609
HH+ S P PP R R QP P H P H
Sbjct: 93 HHHQTSSPSQYPRPPSRDRESQPPPTQPRHHHHQPTVIH 131
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 493 HHYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H 609
HH+ S P PP R R QP P H P H
Sbjct: 93 HHHQTSSPSQYPRPPSRDRESQPPPTQPRHHHHQPTVIH 131
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 510 SPLCIKPPSPAISATSTRSS--NPRFHTPTTPDL 605
SP ++ P+ + S+T ++S NP++H PT DL
Sbjct: 580 SPDAVETPTNSGSSTPPQTSVRNPKYHVPTPTDL 613
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 510 SPLCIKPPSPAISATSTRSS--NPRFHTPTTPDL 605
SP ++ P+ + S+T ++S NP++H PT DL
Sbjct: 482 SPDAVETPTNSGSSTPPQTSVRNPKYHVPTPTDL 515
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = -3
Query: 730 PLAMPSDEGVRYADGASDDNGG-FNPG-ANSF*YGVRGLMEMDVKSGVVGVWNRGFDDRV 557
P P D G G +G PG A G GL D G G G D V
Sbjct: 133 PPGSPGDHGSPGEPGYPGPSGPPGEPGYATIGLIGPPGLAGQDGLDGAPGEPGVGGMDAV 192
Query: 556 DVAEIAGEGGLMHKGETANSDARG*RGG 473
+ + G+ G +GE N ++G RGG
Sbjct: 193 KIVSVDGKIG--RRGEAGNKGSKGSRGG 218
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +2
Query: 431 WTTADVTVEGGNVL-ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 607
W T D + A P SR T+ AL H A GY P ++ + + RL+
Sbjct: 24 WKTEDAPRRNNHPAPAPPKPSRPTVDASALQHAAARLRKTGYNEP-VRGDVENLSDGRLD 82
Query: 608 IHFHQSPD 631
Q PD
Sbjct: 83 RPHQQLPD 90
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTP 707
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 708 SSL 716
++L
Sbjct: 571 TNL 573
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTP 707
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 708 SSL 716
++L
Sbjct: 571 TNL 573
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,951,842
Number of Sequences: 27780
Number of extensions: 333966
Number of successful extensions: 1461
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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