Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22i16
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    26   0.46 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.9  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 639 GSLSVLLDVFDYLQSHSVLQL*ILH 565
           GS+  LLD+FD     ++ QL I+H
Sbjct: 489 GSVEALLDIFDTYTYDTICQLNIVH 513


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 622 KYREAAKLEINVLEKLADVDPDCKN 696
           K +E  KL  ++ EK+  VDP   N
Sbjct: 361 KAKERPKLRKDMYEKMVQVDPTAPN 385


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 622 KYREAAKLEINVLEKLADVDPDCKN 696
           K +E  KL  ++ EK+  VDP   N
Sbjct: 276 KAKERPKLRKDMYEKMVQVDPTAPN 300


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 622 KYREAAKLEINVLEKLADVDPDCKN 696
           K +E  KL  ++ EK+  VDP   N
Sbjct: 595 KAKERPKLRKDMYEKMVQVDPTAPN 619


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 310 ELYKRFLKDHGCKWH 354
           E +KRF +DH  K H
Sbjct: 14  ECHKRFTRDHHLKTH 28


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 453  RQGRQGRTSGLLARLCHGSEIQNHRHARRGHLRQSRR 563
            +Q   G  SGL+ +L  G    N+R   + + +Q ++
Sbjct: 1546 QQKEYGAVSGLVVQLQRGYNSGNNRSGEQANSQQQQQ 1582


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = +3

Query: 114 RIVLHWRYYYTVVCYNRPATHP 179
           R   +W YY    CYN     P
Sbjct: 208 RPAANWGYYAYPYCYNLTPNQP 229


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 15/58 (25%), Positives = 21/58 (36%)
 Frame = +1

Query: 217  YQCSDCVVKEMAELTLKNDRTRLPLKFSSFYELYKRFLKDHGCKWHDVSKLLSVVAEI 390
            Y C DC + E    TLK+             E Y   L+D      D+  +    AE+
Sbjct: 1070 YVCGDCTMAEDVYQTLKHIIQTHGEMTDKQVEAYMLSLRDENRYHEDIFGITLRTAEV 1127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,733
Number of Sequences: 438
Number of extensions: 4806
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)