Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22h21
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 144 3e-34
AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstra... 144 3e-34
AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens ... 144 3e-34
AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens ... 143 5e-34
AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstra... 133 5e-31
BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein pr... 101 2e-21
BC041801-1|AAH41801.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.95
BC014183-1|AAH14183.1| 434|Homo sapiens DDX59 protein protein. 33 0.95
AL445483-6|CAI17056.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.95
AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.95
AK126297-1|BAC86518.1| 181|Homo sapiens protein ( Homo sapiens ... 31 2.9
BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 3.8
AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helic... 31 3.8
>BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 protein.
Length = 622
Score = 144 bits (349), Expect = 3e-34
Identities = 77/172 (44%), Positives = 96/172 (55%)
Frame = +3
Query: 171 DEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETSQEEWGRRYN 350
DED ++Y PYVP+++ A S SE D++ G + N
Sbjct: 27 DEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQQDSGSEPRGDEDDIP--LGPQSN 84
Query: 351 VSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAELAKGIQYEEPIKT 530
VSLLDQH EEE ILESVA+ +ALM V E+AKGI Y++PIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 531 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGL 686
SW PPR +L + E RHE +R K ILVEGD PPPI++F+ MKFP ILRGL
Sbjct: 145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGL 196
>AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstrakt
variant protein.
Length = 622
Score = 144 bits (349), Expect = 3e-34
Identities = 77/172 (44%), Positives = 96/172 (55%)
Frame = +3
Query: 171 DEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETSQEEWGRRYN 350
DED ++Y PYVP+++ A S SE D++ G + N
Sbjct: 27 DEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQQDSGSEPRGDEDDIP--LGPQSN 84
Query: 351 VSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAELAKGIQYEEPIKT 530
VSLLDQH EEE ILESVA+ +ALM V E+AKGI Y++PIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 531 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGL 686
SW PPR +L + E RHE +R K ILVEGD PPPI++F+ MKFP ILRGL
Sbjct: 145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGL 196
>AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ14862 fis, clone PLACE1001739, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 144 bits (349), Expect = 3e-34
Identities = 77/172 (44%), Positives = 96/172 (55%)
Frame = +3
Query: 171 DEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETSQEEWGRRYN 350
DED ++Y PYVP+++ A S SE D++ G + N
Sbjct: 27 DEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQEDSGSEPRGDEDDIP--LGPQSN 84
Query: 351 VSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAELAKGIQYEEPIKT 530
VSLLDQH EEE ILESVA+ +ALM V E+AKGI Y++PIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 531 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGL 686
SW PPR +L + E RHE +R K ILVEGD PPPI++F+ MKFP ILRGL
Sbjct: 145 SWTPPRYVLSMSEERHERVREKYHILVEGDGIPPPIKSFKEMKFPAAILRGL 196
>AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ10393 fis, clone NT2RM4000191, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 143 bits (347), Expect = 5e-34
Identities = 77/172 (44%), Positives = 96/172 (55%)
Frame = +3
Query: 171 DEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTKSSSENDHDDETSQEEWGRRYN 350
DED ++Y PYVP+++ A S SE D++ G + N
Sbjct: 27 DEDDEDYVPYVPLRQRRQLLLQKLLQRRREGAAEEEQQDSGSEPRGDEDDIP--LGPQSN 84
Query: 351 VSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESVAQSKALMGVAELAKGIQYEEPIKT 530
VSLLDQH EEE ILESVA+ +ALM V E+AKGI Y++PIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 531 SWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGL 686
SW PPR +L + E RHE +R K ILVEGD PPPI++F+ MKFP ILRGL
Sbjct: 145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPATILRGL 196
>AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstrakt
protein.
Length = 621
Score = 133 bits (322), Expect = 5e-31
Identities = 70/140 (50%), Positives = 83/140 (59%)
Frame = +3
Query: 267 EAAADTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHI 446
E D+ S D DD G + NVSLLDQH EEE I
Sbjct: 60 EEQQDSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKI 115
Query: 447 LESVAQSKALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDP 626
LESVA+ +ALM V E+AKGI Y++PIKTSW PPR +L + E RHE +R K ILVEGD
Sbjct: 116 LESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGI 175
Query: 627 PPPIRTFQHMKFPKGILRGL 686
PPPI++F+ MKFP ILRGL
Sbjct: 176 PPPIKSFKEMKFPAAILRGL 195
>BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 101 bits (242), Expect = 2e-21
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +3
Query: 477 MGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 656
M V E+AKGI Y++PIKTSW PPR +L + E RHE +R K ILVEGD PPPI++F+ M
Sbjct: 1 MSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM 60
Query: 657 KFPKGILRGL 686
KFP ILRGL
Sbjct: 61 KFPAAILRGL 70
>BC041801-1|AAH41801.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 EEPIKTSW--RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 668
E P+ S+ + IL L E + E ++ +L ILV+G + PI F+H P+
Sbjct: 159 ESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPE 212
>BC014183-1|AAH14183.1| 434|Homo sapiens DDX59 protein protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 EEPIKTSW--RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 668
E P+ S+ + IL L E + E ++ +L ILV+G + PI F+H P+
Sbjct: 159 ESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPE 212
>AL445483-6|CAI17056.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 EEPIKTSW--RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 668
E P+ S+ + IL L E + E ++ +L ILV+G + PI F+H P+
Sbjct: 159 ESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPE 212
>AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 580
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 EEPIKTSW--RPPRCILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPK 668
E P+ S+ + IL L E + E ++ +L ILV+G + PI F+H P+
Sbjct: 159 ESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPE 212
>AK126297-1|BAC86518.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ44317 fis, clone TRACH3000586. ).
Length = 181
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -2
Query: 558 RGCNVVDAMMSLLALHIVYL*PTPP-LPSGLCSALHSRVYVPLLLPVFRLQTELGPRPV- 385
R C + DA+ S L++ +++L PP +P C +H+ L ++ + P P
Sbjct: 76 RRCFLGDAVASFLSVLVIFLSSLPPYIPHDRCVYVHTS--ASLHSAPCQVSCQSVPLPSG 133
Query: 384 SSTHCAGPAMKHCNVCP 334
S+T C H VCP
Sbjct: 134 SATSCTDSTTAHTCVCP 150
>BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 52 protein.
Length = 599
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 561 LPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 656
L + + +RNK +I V+G D P PI TFQ +
Sbjct: 135 LRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 166
>AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ36342 fis, clone THYMU2006666, highly similar to
Homo sapiens putative ATP-dependent RNA helicase ROK1
mRNA. ).
Length = 360
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 561 LPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 656
L + + +RNK +I V+G D P PI TFQ +
Sbjct: 27 LRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 58
>AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ10790 fis, clone NT2RP4000518, weakly similar to
ATP-DEPENDENT RNA HELICASE ROK1. ).
Length = 491
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 561 LPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 656
L + + +RNK +I V+G D P PI TFQ +
Sbjct: 27 LRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 58
>AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helicase
ROK1 isoform a variant protein.
Length = 512
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 561 LPETRHEMIRNKLRILVEGDDPPPPIRTFQHM 656
L + + +RNK +I V+G D P PI TFQ +
Sbjct: 134 LRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,635,959
Number of Sequences: 237096
Number of extensions: 2170724
Number of successful extensions: 6252
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6196
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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