Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22h17
         (799 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142676-1|AAI42677.1|  940|Homo sapiens UDP-N-acetyl-alpha-D-ga...    31   4.8  
AY277591-1|AAP34404.1|  940|Homo sapiens GalNAc-T5 protein.            31   4.8  
AJ505956-1|CAD44537.1|  169|Homo sapiens polypeptide N-acetylgal...    31   4.8  
AJ245539-1|CAB65104.1|  668|Homo sapiens GalNAc-T5 protein.            31   4.8  
AF154107-1|AAF15313.1|  610|Homo sapiens UDP-GalNAc:polypeptide ...    31   4.8  

>BC142676-1|AAI42677.1|  940|Homo sapiens
            UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferas protein.
          Length = 940

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +3

Query: 459  DRNKDIAWTNKSLSKY---INQHCELTNNIQLRDMVDSVSSNLIKM-----IKKLNQWYQ 614
            +RNK + W +KS S +   +  H    NN QL  +  + S  ++K+     +K   +W  
Sbjct: 875  NRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKF 934

Query: 615  QKIYE 629
            +K YE
Sbjct: 935  EKYYE 939


>AY277591-1|AAP34404.1|  940|Homo sapiens GalNAc-T5 protein.
          Length = 940

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +3

Query: 459  DRNKDIAWTNKSLSKY---INQHCELTNNIQLRDMVDSVSSNLIKM-----IKKLNQWYQ 614
            +RNK + W +KS S +   +  H    NN QL  +  + S  ++K+     +K   +W  
Sbjct: 875  NRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKF 934

Query: 615  QKIYE 629
            +K YE
Sbjct: 935  EKYYE 939


>AJ505956-1|CAD44537.1|  169|Homo sapiens polypeptide
           N-acetylgalactosaminyltransferase 5 protein.
          Length = 169

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +3

Query: 459 DRNKDIAWTNKSLSKY---INQHCELTNNIQLRDMVDSVSSNLIKM-----IKKLNQWYQ 614
           +RNK + W +KS S +   +  H    NN QL  +  + S  ++K+     +K   +W  
Sbjct: 104 NRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKF 163

Query: 615 QKIYE 629
           +K YE
Sbjct: 164 EKYYE 168


>AJ245539-1|CAB65104.1|  668|Homo sapiens GalNAc-T5 protein.
          Length = 668

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +3

Query: 459 DRNKDIAWTNKSLSKY---INQHCELTNNIQLRDMVDSVSSNLIKM-----IKKLNQWYQ 614
           +RNK + W +KS S +   +  H    NN QL  +  + S  ++K+     +K   +W  
Sbjct: 603 NRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKF 662

Query: 615 QKIYE 629
           +K YE
Sbjct: 663 EKYYE 667


>AF154107-1|AAF15313.1|  610|Homo sapiens UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 5 protein.
          Length = 610

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +3

Query: 459 DRNKDIAWTNKSLSKY---INQHCELTNNIQLRDMVDSVSSNLIKM-----IKKLNQWYQ 614
           +RNK + W +KS S +   +  H    NN QL  +  + S  ++K+     +K   +W  
Sbjct: 545 NRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKF 604

Query: 615 QKIYE 629
           +K YE
Sbjct: 605 EKYYE 609


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,262,543
Number of Sequences: 237096
Number of extensions: 2052449
Number of successful extensions: 15124
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15124
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)