Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22h17
         (799 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122189-1|AAM52701.1|  336|Drosophila melanogaster LD44187p pro...    33   0.34 
AE014297-2296|AAF55381.1|  322|Drosophila melanogaster CG3995-PA...    33   0.34 
AY113506-1|AAM29511.1|  491|Drosophila melanogaster RE59088p pro...    31   1.4  
AE014134-1860|AAF52931.2|  491|Drosophila melanogaster CG5096-PA...    31   1.4  
BT021282-1|AAX33430.1|  991|Drosophila melanogaster RE36502p pro...    31   1.8  
AE014297-4178|AAN14129.1|  956|Drosophila melanogaster CG12877-P...    31   1.8  
AE014297-4177|ABC66193.1|  991|Drosophila melanogaster CG12877-P...    31   1.8  
AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-P...    31   1.8  
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    30   3.2  
AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-P...    30   4.2  

>AY122189-1|AAM52701.1|  336|Drosophila melanogaster LD44187p
           protein.
          Length = 336

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = +3

Query: 228 ESVNTLKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVL-TK 404
           E++ TL R+     N+ V   +  ++D+E+    N  T++ +D + +  P E+   L T 
Sbjct: 177 ETIATLCRL-----NEDVSQIIMKVSDDEMH--ENSTTEFDVDEVEDVVPEEDGGALQTS 229

Query: 405 GNYAHERNPFPRE-ECISFDRNKDIAWTNKSLSKYINQHCE-LTNNIQLRDMVDSVSSNL 578
             Y +E      + + +    NK  A  +  L++      + ++NN++   MV   ++++
Sbjct: 230 AEYVYEPEENKTDIDPLYLQSNKRAALASSRLAEEETTLLDKISNNLE---MVHDTANSV 286

Query: 579 IKMIKKLNQWYQQKIYED 632
              + +    Y+QK+YED
Sbjct: 287 QLALNEFFVLYKQKLYED 304


>AE014297-2296|AAF55381.1|  322|Drosophila melanogaster CG3995-PA
           protein.
          Length = 322

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = +3

Query: 228 ESVNTLKRMADIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVL-TK 404
           E++ TL R+     N+ V   +  ++D+E+    N  T++ +D + +  P E+   L T 
Sbjct: 163 ETIATLCRL-----NEDVSQIIMKVSDDEMH--ENSTTEFDVDEVEDVVPEEDGGALQTS 215

Query: 405 GNYAHERNPFPRE-ECISFDRNKDIAWTNKSLSKYINQHCE-LTNNIQLRDMVDSVSSNL 578
             Y +E      + + +    NK  A  +  L++      + ++NN++   MV   ++++
Sbjct: 216 AEYVYEPEENKTDIDPLYLQSNKRAALASSRLAEEETTLLDKISNNLE---MVHDTANSV 272

Query: 579 IKMIKKLNQWYQQKIYED 632
              + +    Y+QK+YED
Sbjct: 273 QLALNEFFVLYKQKLYED 290


>AY113506-1|AAM29511.1|  491|Drosophila melanogaster RE59088p
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 564 VSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSYNAVTNI-ILPLSKTE 740
           + +NL+   +KL  W   + +ED    +TN    N+ F   NL +N +T++ ILP    E
Sbjct: 54  IDTNLLDCSEKLQDWLSAEDWED----LTNG---NVVFKTINLEHNNLTSVPILPKYDVE 106

Query: 741 N 743
           N
Sbjct: 107 N 107


>AE014134-1860|AAF52931.2|  491|Drosophila melanogaster CG5096-PA
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 564 VSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSYNAVTNI-ILPLSKTE 740
           + +NL+   +KL  W   + +ED    +TN    N+ F   NL +N +T++ ILP    E
Sbjct: 54  IDTNLLDCSEKLQDWLSAEDWED----LTNG---NVVFKTINLEHNNLTSVPILPKYDVE 106

Query: 741 N 743
           N
Sbjct: 107 N 107


>BT021282-1|AAX33430.1|  991|Drosophila melanogaster RE36502p
           protein.
          Length = 991

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +3

Query: 258 DIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGNYAHERNPFP 437
           +ID    VE+E  + N++E         + KID ++ N   + NT LT    +HE++  P
Sbjct: 129 EIDEQMQVEIEEQVQNNDE---------EQKIDTVAENEEDQENTQLTDARDSHEKDRKP 179

Query: 438 REE 446
            +E
Sbjct: 180 SKE 182


>AE014297-4178|AAN14129.1|  956|Drosophila melanogaster CG12877-PB,
           isoform B protein.
          Length = 956

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +3

Query: 258 DIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGNYAHERNPFP 437
           +ID    VE+E  + N++E         + KID ++ N   + NT LT    +HE++  P
Sbjct: 129 EIDEQMQVEIEEQVQNNDE---------EQKIDTVAENEEDQENTQLTDARDSHEKDRKP 179

Query: 438 REE 446
            +E
Sbjct: 180 SKE 182


>AE014297-4177|ABC66193.1|  991|Drosophila melanogaster CG12877-PC,
           isoform C protein.
          Length = 991

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +3

Query: 258 DIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGNYAHERNPFP 437
           +ID    VE+E  + N++E         + KID ++ N   + NT LT    +HE++  P
Sbjct: 129 EIDEQMQVEIEEQVQNNDE---------EQKIDTVAENEEDQENTQLTDARDSHEKDRKP 179

Query: 438 REE 446
            +E
Sbjct: 180 SKE 182


>AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-PA,
           isoform A protein.
          Length = 1010

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +3

Query: 258 DIDFNKPVEVEVTIINDEEIEFVSNWVTDYKIDNISNNFPIENNTVLTKGNYAHERNPFP 437
           +ID    VE+E  + N++E         + KID ++ N   + NT LT    +HE++  P
Sbjct: 129 EIDEQMQVEIEEQVQNNDE---------EQKIDTVAENEEDQENTQLTDARDSHEKDRKP 179

Query: 438 REE 446
            +E
Sbjct: 180 SKE 182


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
           protein.
          Length = 4498

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 440 SWEWISFMCIIALCENSIIFNGKII*YIVYFIICDPVRNKFNLFIIN 300
           +W+ +  +C +A C N     G+++ Y   + +  P   KFN   IN
Sbjct: 31  AWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNIN 77


>AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-PA
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 507 YILINFYLSTLYLYF-CQTICILLLGMDFFHVHNCPL*EQYYFQW 376
           Y ++ F+L+T + +F C  + +L+    + H  N P    + FQW
Sbjct: 142 YFVMAFFLATSWSFFLCILLLLLITSPMWVHQQNLPFHAAFPFQW 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,038,043
Number of Sequences: 53049
Number of extensions: 634686
Number of successful extensions: 1741
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)