Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22h17
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 30 0.029
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 29 0.038
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 29 0.050
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 28 0.12
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 27 0.27
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 25 0.62
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.81
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 24 1.9
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 5.7
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 22 7.6
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 22 7.6
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 22 7.6
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 7.6
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 7.6
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 29.9 bits (64), Expect = 0.029
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSYNAV 707
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINYIEQ 118
Query: 708 TNIILPL 728
I +P+
Sbjct: 119 IPIPVPV 125
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.5 bits (63), Expect = 0.038
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K+I L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 29.1 bits (62), Expect = 0.050
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 528 TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
T+ + RD + S K++ L+ Y Y +Y N + Y N K Y+N++Y
Sbjct: 62 TSKERSRDRRERERSKEPKIVSSLSNNYNYSNYNNYNNN---NNYNNYKKLYYNINY 115
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 600 NQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSY 698
N Y Y +Y N N+ Y N K Y+N++Y
Sbjct: 93 NNNYNNNNYNNY--NYNNNNYNNYKKLYYNINY 123
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 26.6 bits (56), Expect = 0.27
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 459 DRNKDIAWTNKSLSKYINQHCELTNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYP 638
DR + K+LSK I+QH QL D +++V + + +++ + NQ Q+ + +
Sbjct: 346 DRVVALEAEKKNLSKVIDQHS------QLIDTLENVLAIVDRLMDETNQLTLQETADAF- 398
Query: 639 KNITNSQYTNIKFY 680
K++ + Y K Y
Sbjct: 399 KDLQDKYYEEYKMY 412
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.62
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 642 NITNSQYTNIKFYYFNLSYNAVTNIILPL 728
N N+ Y N K Y+N++Y + +P+
Sbjct: 95 NYNNNNYNNYKKLYYNINYIEQVPVPIPV 123
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 600 NQWYQQKIYEDYPKNITNSQYTNIKFYYFNL 692
N Y Y + N N+ Y N K Y+N+
Sbjct: 326 NNNYNNNNYNNNYNNYNNNNYNNYKKLYYNI 356
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 100 LCKNYILKVKINKTERCIKIWNQN 171
+C+ L + ++ TE +KIW QN
Sbjct: 35 VCERLNLALSLSLTETQVKIWFQN 58
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +3
Query: 336 VTDYKIDNISNNFPIENNTVLTKGNYAHERNPFPREECISFDR 464
V+DYK D + N PI + + P R FDR
Sbjct: 605 VSDYKDDRVEQNEPIGCKDASSYCGLRDRKYPDARAMGYPFDR 647
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 139 TERCIKIWNQN 171
TER IKIW QN
Sbjct: 48 TERQIKIWFQN 58
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 139 TERCIKIWNQN 171
TER IKIW QN
Sbjct: 48 TERQIKIWFQN 58
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 139 TERCIKIWNQN 171
TER IKIW QN
Sbjct: 48 TERQIKIWFQN 58
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 139 TERCIKIWNQN 171
TER IKIW QN
Sbjct: 310 TERQIKIWFQN 320
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 615 QKIYEDYPKNITNSQYTN 668
QK+ ++ P +I QYTN
Sbjct: 167 QKLQKEIPNSIILDQYTN 184
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,865
Number of Sequences: 438
Number of extensions: 5300
Number of successful extensions: 25
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -