Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22h06
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027580-1|BAB55209.1|  320|Homo sapiens protein ( Homo sapiens ...    32   2.7  
AB067488-1|BAB67794.1| 1265|Homo sapiens KIAA1901 protein protein.     32   2.7  

>AK027580-1|BAB55209.1|  320|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14674 fis, clone NT2RP2003912, highly similar to
           SERINE/THREONINE-PROTEIN KINASE NEK1 (EC 2.7.1.-). ).
          Length = 320

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +2

Query: 533 LGPGRRLVPFHNHNARGVYEHYHCAKRNAALRRSCGPHALLARPVSAHGRQLDGLAPDGR 712
           LG G  + P  + ++RG YEHYH        +R+    A   R +   G    G+ P  R
Sbjct: 219 LGSGGTIAP-SSFSSRGQYEHYHAIFDQMQQQRAEDNEAKWKREIYGRGLPERGILPGVR 277

Query: 713 QLDAHGCALH 742
               +G A H
Sbjct: 278 PGFPYGAAGH 287


>AB067488-1|BAB67794.1| 1265|Homo sapiens KIAA1901 protein protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +2

Query: 533 LGPGRRLVPFHNHNARGVYEHYHCAKRNAALRRSCGPHALLARPVSAHGRQLDGLAPDGR 712
           LG G  + P  + ++RG YEHYH        +R+    A   R +   G    G+ P  R
Sbjct: 433 LGSGGTIAP-SSFSSRGQYEHYHAIFDQMQQQRAEDNEAKWKREIYGRGLPERGILPGVR 491

Query: 713 QLDAHGCALH 742
               +G A H
Sbjct: 492 PGFPYGAAGH 501


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,342,466
Number of Sequences: 237096
Number of extensions: 2143121
Number of successful extensions: 6143
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6143
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)