Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22g24
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 47 2e-06
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 46 7e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 45 1e-05
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 44 3e-05
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 40 4e-04
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 38 0.002
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 37 0.003
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 31 0.13
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.90
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 29 0.90
SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces pomb... 28 1.6
SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces pom... 28 1.6
SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1 |Schiz... 27 2.1
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 26 4.8
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 4.8
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 26 6.3
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 26 6.3
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3
Query: 264 DDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPL 386
DD G + LHWAC GH++++++L++ A I V N TPL
Sbjct: 245 DDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 171 EMEDIFQWCREGNALQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIK--RG 344
+++D+ CR + + ++ ++++ D++G S LH A GH+ +V+ +I
Sbjct: 2 DVDDLIYACRAADEELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYLNK 61
Query: 345 ARINVTNMGDDTPLHLSAAHGHRPVVQLI 431
IN N +T +H +A +GH + +L+
Sbjct: 62 EVINAQNESGNTAMHWAALNGHAEICKLL 90
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/59 (23%), Positives = 34/59 (57%)
Frame = +3
Query: 252 MNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAHGHRPVVQL 428
+N ++ G + +HWA GH +I ++L++ G ++ N+ + +P++ + + V+ L
Sbjct: 64 INAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDL 122
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 LHWACKEGHLKIVEMLIKRGAR-INVTNMGDDTPLHLSAAHGHRPVVQLIHKKLN 446
L +AC+ ++++ +I++ + ++ + ++ LH+++A+GH VVQ I LN
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYLN 60
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 44.8 bits (101), Expect = 1e-05
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +3
Query: 255 NQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPL 386
N D++G++P+H A GH ++++L++RG IN+ + +TPL
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 279 SPLHW-ACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAHGHRPVVQLI 431
+P W A +G +V + G N + TP+H + ++GH +++++
Sbjct: 5 TPNIWIAASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKIL 56
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 43.6 bits (98), Expect = 3e-05
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 201 EGNALQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDT 380
+G V++ D + + D G +PLH A G +++V+ LI + A +N ++ T
Sbjct: 117 KGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFT 176
Query: 381 PLHLSAAHGHRPV-VQLI 431
PLH + A GH V V+L+
Sbjct: 177 PLHFALAEGHPDVGVELV 194
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 213 LQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGA 347
+QV +L +N D +GF+PLH+A EGH + L++ GA
Sbjct: 154 IQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Score = 33.1 bits (72), Expect = 0.042
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 231 LDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKR 341
+ + + +N DD +PLHWAC G + + L+K+
Sbjct: 23 IQNDPNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQ 59
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 39.9 bits (89), Expect = 4e-04
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 174 MEDIFQWCREGNALQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARI 353
M +F +G V+ + + D+N D+ G + LHWA + I + L++ GA +
Sbjct: 1 MGSLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADV 60
Query: 354 NVTNMGD--DTPLHLSAAHG 407
N GD P+H +A G
Sbjct: 61 NAIG-GDLQAAPIHWAAKRG 79
Score = 39.9 bits (89), Expect = 4e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 225 VWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAH 404
V+L + ++ DD +PL WA G+ I L++ GA + T+ TPLH S
Sbjct: 118 VYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVG 177
Query: 405 GHRPVVQLIHKK 440
G+ ++LI K+
Sbjct: 178 GNLKCMKLILKE 189
Score = 39.5 bits (88), Expect = 5e-04
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +3
Query: 192 WCREGNALQVRVWLDDTEHDMNQ-GDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNM 368
W + + +L + D+N G D +P+HWA K G +K V L++ GA + +
Sbjct: 40 WAALNQQIPICKFLLEHGADVNAIGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDK 99
Query: 369 GDDTPLHLSAAHGHRP--VVQLIH 434
LHL A H P VV L+H
Sbjct: 100 QGFNCLHL-AVHAASPLLVVYLLH 122
Score = 31.1 bits (67), Expect = 0.17
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 249 DMNQGDDHGFSPLHWACKEGHLKIVEMLIKRG 344
D+ D+ +PLHW+ G+LK +++++K G
Sbjct: 159 DVLATDEDKMTPLHWSIVGGNLKCMKLILKEG 190
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +3
Query: 264 DDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAHGHRPVVQLI 431
D GF+ LH A +V L+ +++ + TPL ++ HG+ P+ +
Sbjct: 98 DKQGFNCLHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCL 153
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 DDHGFSPLHWACKEGHLKIVEMLIKR-GARINVTNMGDDTPLHLSAAHGHRPVVQLI 431
D F L AC+ G L++V+ L++ IN + D +PL L++ GH PVV+ +
Sbjct: 49 DTQEFLELCEACRRGDLEVVKSLVENYNTPINQVDQFDYSPLVLASLCGHEPVVKFL 105
Score = 35.1 bits (77), Expect = 0.010
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 171 EMEDIFQWCREGNALQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGA 347
E ++ + CR G+ V+ +++ +NQ D +SPL A GH +V+ L++ GA
Sbjct: 52 EFLELCEACRRGDLEVVKSLVENYNTPINQVDQFDYSPLVLASLCGHEPVVKFLLENGA 110
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 249 DMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAHGHRPVVQL 428
D+N+ D G++PLH+A H I L+ GA+ +V P+ LS++ ++L
Sbjct: 887 DVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPIDLSSSE----PIKL 942
Query: 429 IHKKLN 446
+ K+ N
Sbjct: 943 VFKEAN 948
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 270 HGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAH 404
H +PLH+A + + K+V L++ GA + N TP +S +
Sbjct: 432 HTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGN 476
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.90
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 351 INVTNMGDDTPLHLSAAHGHRPVVQ--LIHKKLN**KKSILTAGTV*LHTTPRLQYRSFQ 524
+N + +TPLHL+A G + +V+ L+H +N + + T+P+L F
Sbjct: 82 VNAYDKNKNTPLHLAAMAGRQDIVEALLLHPDINYNLVNANNKKAYQVATSPQLM--DFM 139
Query: 525 YNCFVTY 545
+VTY
Sbjct: 140 KGFYVTY 146
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 207 NALQVRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLI 335
N V+ L + D+N D + +PLH A G IVE L+
Sbjct: 67 NVQMVKHILSVFDVDVNAYDKNKNTPLHLAAMAGRQDIVEALL 109
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 28.7 bits (61), Expect = 0.90
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 264 DDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPL 386
D+ G + LHWA + +++ LI +GA N+ +T L
Sbjct: 354 DELGHAALHWAAAVAKMPLLQALIHKGANPLRGNLTGETAL 394
>SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 376
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 219 VRVWLDDTEHDMNQGDDHGFSPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSA 398
V + ++ E+ + G+D FSP C E +K + + ARI+ PLH
Sbjct: 137 VYITAEEIENKLILGNDIHFSPTGLICLENTIKGAVVPLDEVARISGLAKAHKIPLHCDG 196
Query: 399 A 401
A
Sbjct: 197 A 197
>SPCP31B10.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 287
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 640 LRRNRLGYRISLQRHERMRSRSVSDSAIP 726
+RR+ GY + R +RM+SR V+ +++P
Sbjct: 237 IRRSAPGYGVRRSRRQRMQSRPVAYTSLP 265
>SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 464 FNCWYSLTPYYAALTVSKLPVQLFCNILFSTIVYFMAGIPFNVMRFITFCVV 619
+ WYS+TP A+ ++K V I I+ +G N ++F +C V
Sbjct: 48 YQSWYSVTPEKVAVAIAKSVVDF---IQPELIIDAFSGCGGNTIQFAKYCPV 96
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 598 PHYVEWNTSHEVNYCGEQYVTKQLYWKLRY 509
P + + NTSH NY +Q ++K +W+ Y
Sbjct: 413 PKFSQINTSHLYNYSTKQMISK--FWETYY 440
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 547 VLHNSLLHGWYSIQRNEV 600
VL +SLLH WYS+ + +
Sbjct: 274 VLRSSLLHQWYSLPKQSI 291
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 25.8 bits (54), Expect = 6.3
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +3
Query: 180 DIFQWCREGNALQVRVWLDDTE--HDMNQGDDHGFSPLHWAC------KEGHLKIVEMLI 335
D C + +L+ WL D + N+ G +PLH+A +E L++VEML+
Sbjct: 49 DCVHVCTKYGSLECLDWLLDISGVNLNNRCRMTGDTPLHFAVMFIKKDQETALRMVEMLM 108
Query: 336 KRGARINVTNMGDDTPLHLSAAHGH 410
+ GA +TN P+ L H
Sbjct: 109 EVGADPLLTNNDGFRPIDLVPGDFH 133
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 675 KTDPIAKPIPSETKDTMFPTTQNVMNLIT 589
K + AKPIP+E K +F NV L++
Sbjct: 39 KDETSAKPIPTEKKLKVFKKDDNVETLLS 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,899,733
Number of Sequences: 5004
Number of extensions: 59471
Number of successful extensions: 200
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -