Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22g22
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    32   0.50 
U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical pr...    29   2.6  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    29   2.6  
AF016424-9|AAB65327.2|  530|Caenorhabditis elegans Udp-glucurono...    29   3.5  
AL032654-10|CAB63391.1|  819|Caenorhabditis elegans Hypothetical...    29   4.6  
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical pr...    28   6.1  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     28   6.1  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = +1

Query: 436 DISVRYIQLKESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSM--VHHAGSHYDNVRI 609
           D+++    L E  FE    V  T+  N    +++   Y N   S   V H   ++ +  I
Sbjct: 238 DVNIEVYTLPE--FETEESVQYTVIDN---HVRDAIIYCNVTHSFPPVRHYTFYHGDEEI 292

Query: 610 NKPDEFDMVIEIGVPLCFHEKTNNRNESDI 699
              D+F++ + +GV    H K +N NE+D+
Sbjct: 293 KMSDKFNIFVNVGVSQGAHLKIHNVNENDL 322


>U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical
           protein T19A5.3b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 478 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSMVHHAGSHYDNVRINKPDEFDMVIEIGVP 654
           E   K ++  ++ L    K I+ P  N  SS   H+G HY   ++N P + + ++E+  P
Sbjct: 61  EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 120


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 478 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSMVHHAGSHYDNVRINKPDEFDMVIEIGVP 654
           E   K ++  ++ L    K I+ P  N  SS   H+G HY   ++N P + + ++E+  P
Sbjct: 129 EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 188


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = -3

Query: 708 FKFYIALVS-IICFLVEAKR----HTYFDNHVEFIGFVYTHIVVVTPGMMYHARISVVVW 544
           F ++I+ +S +IC L + KR    H YF++ + FI F    I++V+  M+      V  +
Sbjct: 61  FLWFISSISALICVLQDQKRYLRFHIYFNSVITFIYFCKLIILLVSINMVTSILCIVCNF 120

Query: 543 INF 535
           +NF
Sbjct: 121 VNF 123


>Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical
           protein T11A5.2 protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 690 LVSIICFLVEAKRHTYFDNHVEFIGFVYTHIVVVTPGMMYHARISVVVWINF 535
           L++I+ FL+ A    +  +   F G V  + V  TP   Y A++   V I F
Sbjct: 146 LLAIVHFLIAALPLCFLYSQTRFDGAVMYYCVTATPSAPYSAQVGATVSICF 197


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
            protein 3 protein.
          Length = 3343

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 518  FTRK*KKLIHTTTDIRAWYIMPGVTTTMCV*TNPMNSTW 634
            F R  + L   T D R  +    + TT+ V T+P NSTW
Sbjct: 2774 FPRTEENLYEITKDCRLLFNSDVINTTIPVVTSPANSTW 2812


>AF016424-9|AAB65327.2|  530|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein61 protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 609 YTHIVVVTP-GMMYHARISVVVWIN 538
           YTHI    P G+++HA+I   VW+N
Sbjct: 143 YTHIYSTCPLGLIHHAKIPSWVWLN 167


>AL032654-10|CAB63391.1|  819|Caenorhabditis elegans Hypothetical
           protein Y52B11A.10 protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 379 ISDKVPYNPKITNLESLLADISVRYIQLKESDFELHYKVLDTIFQNLHKK 528
           I DK+  N  +TNL ++   I+  Y  LK++ + L  + +D I     KK
Sbjct: 458 IIDKLAENLNLTNLFAIRTLIAYAYKSLKKTSWPLVTQKIDEIHSEFEKK 507


>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -2

Query: 730  EHSRHVWVQ----ILYRSRFDYL 674
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375


>Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -2

Query: 730 EHSRHVWVQ----ILYRSRFDYL 674
           +H+RH+W+Q    ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -2

Query: 730  EHSRHVWVQ----ILYRSRFDYL 674
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375


>Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -2

Query: 730 EHSRHVWVQ----ILYRSRFDYL 674
           +H+RH+W+Q    ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -2

Query: 730  EHSRHVWVQ----ILYRSRFDYL 674
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1356 QHTRHLWLQSLILILYKYRFDQL 1378


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +1

Query: 442  SVRYIQLKESDFELHYKVLDT-----IFQNLHKKMKEIDPYYNRYSSMVHHAGS 588
            ++R   L E ++ + YK+ D      IF+NL KK++  +P +  Y+      G+
Sbjct: 1268 NIRVKDLTEKEYNI-YKIWDLPKLTEIFKNLKKKLEHSNPMFCHYADFKRRCGN 1320


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,342
Number of Sequences: 27780
Number of extensions: 304432
Number of successful extensions: 1013
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)