Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22g12
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p pro...   182   6e-46
AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA ...   182   6e-46
BT001741-1|AAN71496.1|  635|Drosophila melanogaster RE73310p pro...    29   4.9  
AE013599-484|AAM71105.1|  635|Drosophila melanogaster CG30496-PA...    29   4.9  

>AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p
           protein.
          Length = 198

 Score =  182 bits (442), Expect = 6e-46
 Identities = 80/159 (50%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
 Frame = +3

Query: 255 NAMLLVCTLLFTLTHINADSD-EGSISKIGSSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 431
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 432 KYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 611
           KYP+I V G NYDPPG N YLS++I   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 612 KLYACMMMFFLANMIEGQLISSGAFEISLNNIPLWSKIE 728
           K+YACMM+FFL NM+E QLISSGAFEI+LN++P+WSK++
Sbjct: 128 KIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVWSKLQ 166


>AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA
           protein.
          Length = 198

 Score =  182 bits (442), Expect = 6e-46
 Identities = 80/159 (50%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
 Frame = +3

Query: 255 NAMLLVCTLLFTLTHINADSD-EGSISKIGSSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 431
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 432 KYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 611
           KYP+I V G NYDPPG N YLS++I   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 612 KLYACMMMFFLANMIEGQLISSGAFEISLNNIPLWSKIE 728
           K+YACMM+FFL NM+E QLISSGAFEI+LN++P+WSK++
Sbjct: 128 KIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVWSKLQ 166


>BT001741-1|AAN71496.1|  635|Drosophila melanogaster RE73310p
           protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -3

Query: 727 SILDQSGMLLR--DISKAPEDISCPSIMFAKKNIIMHAYSLFSRHQLHQAGCGLFNQAKI 554
           ++++Q    LR  D S+   ++SC ++   ++ + +HA +++  H L        N  K+
Sbjct: 272 NLVEQRARWLRKLDASRGVYEMSCQNVFLIEEKLPLHAVAMY-YHSLFVGNQLPTNAPKV 330

Query: 553 FTPLSIHMMTNILPKPIIRER 491
           + PL +      L + ++R++
Sbjct: 331 YAPLFLFETIVYLAEVLLRQQ 351


>AE013599-484|AAM71105.1|  635|Drosophila melanogaster CG30496-PA
           protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -3

Query: 727 SILDQSGMLLR--DISKAPEDISCPSIMFAKKNIIMHAYSLFSRHQLHQAGCGLFNQAKI 554
           ++++Q    LR  D S+   ++SC ++   ++ + +HA +++  H L        N  K+
Sbjct: 272 NLVEQRARWLRKLDASRGVYEMSCQNVFLIEEKLPLHAVAMY-YHSLFVGNQLPTNAPKV 330

Query: 553 FTPLSIHMMTNILPKPIIRER 491
           + PL +      L + ++R++
Sbjct: 331 YAPLFLFETIVYLAEVLLRQQ 351


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,115,906
Number of Sequences: 53049
Number of extensions: 694988
Number of successful extensions: 1698
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)