Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22g12
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...   113   9e-26
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...   113   9e-26
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...    88   5e-18
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion transpo...    29   4.5  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   5.9  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    28   5.9  
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score =  113 bits (273), Expect = 9e-26
 Identities = 49/124 (39%), Positives = 77/124 (62%)
 Frame = +3

Query: 357 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 536
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156

Query: 537 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 716
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 216

Query: 717 SKIE 728
           SKIE
Sbjct: 217 SKIE 220


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score =  113 bits (273), Expect = 9e-26
 Identities = 49/124 (39%), Positives = 77/124 (62%)
 Frame = +3

Query: 357 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 536
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+ P  +  Y+++ + F KM V++ 
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153

Query: 537 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISLNNIPLW 716
           +L G+N F       P        NK+ +CM++F L N++E  LIS+GAFE+ L N  +W
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 213

Query: 717 SKIE 728
           SKIE
Sbjct: 214 SKIE 217


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
 Frame = +3

Query: 294 THINADSDEGSISKIGSSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 470
           T +N +S    +   G S     + I YC SCGYK+ F  +    ++KYP + + G N+ 
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108

Query: 471 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 650
           P  +   L++I+G  K+ +I  +++G N F ++    P        N+    +++F + N
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGN 168

Query: 651 MIEGQLISSGAFEISLNNIPLWSKI 725
           + E  L S+GAFEI L +  +WSKI
Sbjct: 169 LFESTLSSTGAFEIFLGDKQIWSKI 193


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 525 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANM 653
           V+  +L G  +++ +   Q  W+SW L N LY  ++MF    M
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMFGFITM 493


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +1

Query: 70  NKYRFVFGFVSVHYKIENIRSP-KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTIC 246
           N+Y  +F  V+  Y +  +    K  Y  + R N C S DLHP ++     +  + Q  C
Sbjct: 12  NRYS-LFAIVTGIYSMPTVYILIKLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIAC 66

Query: 247 FT*TRCYSFVLY 282
           F    C  F+++
Sbjct: 67  FF-NVCIKFLIF 77


>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 495 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFLANMIEGQ 665
           S+ + +  +L++  ++ G  I++ L  P  +W SW LE   N +YA   +F L  +    
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFMLPQLFVNY 457

Query: 666 LISSGA 683
            + S A
Sbjct: 458 KLKSVA 463


>Z99281-46|CAB54455.3|  795|Caenorhabditis elegans Hypothetical
           protein Y57G11C.32 protein.
          Length = 795

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +3

Query: 168 PLRKQRSSPIYLLNSVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDE 320
           P    + +PI+  + ++ D+SM N++ +     L+ +  F  + +  +SDE
Sbjct: 158 PKTPSKFAPIFTESILQLDVSMQNDLLFFLEQHLISSAEFIFSELPLESDE 208


>Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical
           protein K12G11.1 protein.
          Length = 749

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 5   KCHLKN*IKEALKQWFLKFHKPISIDLYLVLFLF--ITKLKTFGRLK 139
           K HL+N +K+  K++  +F++P +    L LF+F  I  LK F   K
Sbjct: 59  KPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


>AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion
           transporter SULP-4 protein.
          Length = 749

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 5   KCHLKN*IKEALKQWFLKFHKPISIDLYLVLFLF--ITKLKTFGRLK 139
           K HL+N +K+  K++  +F++P +    L LF+F  I  LK F   K
Sbjct: 59  KPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 379 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 486
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 379 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 486
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 379 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 486
           +L A KR  K  +E  N NT+R  SL+L ++++ LT
Sbjct: 14  LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 461 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPD 348
           S N RNL +  +    + F  LF+   ++ I  +C+PD
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPD 136


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 582  PAWWSWCLENKL-YACMMMFFLANMIEGQLI 671
            P WW+WC +  L YA   M  L ++    LI
Sbjct: 1230 PGWWAWCRDRNLEYALKWMTALLSIFGISLI 1260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,105,051
Number of Sequences: 27780
Number of extensions: 380404
Number of successful extensions: 983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)