Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22g08
(731 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 85 2e-16
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 85 2e-16
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 85 2e-16
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 85 2e-16
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 85 2e-16
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 85 2e-16
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 85 2e-16
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 85 2e-16
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 85 2e-16
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 85 2e-16
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 85 2e-16
DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair exon... 80 9e-15
AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 80 9e-15
Z15017-1|CAA78737.1| 261|Homo sapiens glycoprotein 39 protein. 31 3.2
X68550-1|CAA48554.1| 261|Homo sapiens TRAP protein. 31 3.2
X67878-1|CAA48077.1| 261|Homo sapiens CD40 ligand protein. 31 3.2
L07414-1|AAA35662.1| 261|Homo sapiens CD40 surface protein prot... 31 3.2
EF064753-1|ABK41936.1| 261|Homo sapiens CD40 ligand (TNF superf... 31 3.2
D31797-1|BAA06599.1| 261|Homo sapiens CD40 ligand protein. 31 3.2
BC074950-1|AAH74950.1| 261|Homo sapiens CD40 ligand (TNF superf... 31 3.2
BC071754-1|AAH71754.1| 261|Homo sapiens CD40 ligand (TNF superf... 31 3.2
AY197739-1|AAP37943.1| 240|Homo sapiens CD154 protein protein. 31 3.2
AL135783-4|CAI42902.1| 240|Homo sapiens CD40 ligand (TNF superf... 31 3.2
AL135783-3|CAI42901.1| 261|Homo sapiens CD40 ligand (TNF superf... 31 3.2
BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open read... 30 9.8
AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open read... 30 9.8
AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens ... 30 9.8
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 68 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 125 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 184
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 185 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 224
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 3 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 59
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 60 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 119
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 120 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 159
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 68 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 125 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 184
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 185 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 224
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +3
Query: 102 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLD---IQSGLPP--------IKKLSF 248
T +FFD+E TGLPF + K+TELC LAV R L+ G PP + KLS
Sbjct: 13 TLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 69
Query: 249 VLNPEKKIHPDVVVLTGLTNESLK--NAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSF 419
+ P K P +TGL+ L F AN +++FL P+P CLVAHNG+ +
Sbjct: 70 CVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRY 129
Query: 420 DYKILLAECNDAGILLPSD-LLCIDSLIGFRKILKTTQKS 536
D+ +L AE G+ D C+DS+ + + + + S
Sbjct: 130 DFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPS 169
>DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2
long form protein.
Length = 278
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 48 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 104
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 105 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 164
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 165 DFPLLCAELRRLGARLPRDTVCLDTLPALR 194
>DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair
exonuclease 2 protein.
Length = 236
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 49 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 105
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 106 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 165
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 166 DFPLLCAELRRLGARLPRDTVCLDTLPALR 195
>AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 49 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 105
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 106 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 165
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 166 DFPLLCAELRRLGARLPRDTVCLDTLPALR 195
>AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 79.8 bits (188), Expect = 9e-15
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 93 RITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDI----QSG---LPPI-KKLSF 248
R T+VF D+E TGLP E +I EL AV R L+ +SG LP + KL+
Sbjct: 6 RAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTL 62
Query: 249 VLNPEKKIHPDVVVLTGLTNESL---KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSF 419
+ PE+ +TGL++E L + A + +FL+ PICLVAHNG +
Sbjct: 63 CMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDY 122
Query: 420 DYKILLAECNDAGILLPSDLLCIDSLIGFR 509
D+ +L AE G LP D +C+D+L R
Sbjct: 123 DFPLLCAELRRLGARLPRDTVCLDTLPALR 152
>Z15017-1|CAA78737.1| 261|Homo sapiens glycoprotein 39 protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>X68550-1|CAA48554.1| 261|Homo sapiens TRAP protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>X67878-1|CAA48077.1| 261|Homo sapiens CD40 ligand protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>L07414-1|AAA35662.1| 261|Homo sapiens CD40 surface protein
protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>EF064753-1|ABK41936.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>D31797-1|BAA06599.1| 261|Homo sapiens CD40 ligand protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>BC074950-1|AAH74950.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>BC071754-1|AAH71754.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgM syndrome) protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AY197739-1|AAP37943.1| 240|Homo sapiens CD154 protein protein.
Length = 240
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AL135783-4|CAI42902.1| 240|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgMxpression) protein.
Length = 240
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>AL135783-3|CAI42901.1| 261|Homo sapiens CD40 ligand (TNF
superfamily, member 5, hyper-IgMcogene) protein.
Length = 261
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 594 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNEQK 713
E +S N EEI + F KD ++ E++KKEN QK
Sbjct: 76 ERSLSLLNCEEIKSQFEGFVKDIMLNKEETKKENSFEMQK 115
>BC005364-1|AAH05364.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-2|CAH73629.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL365185-1|CAH73628.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-2|CAH70341.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL353149-1|CAH70340.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-2|CAH73712.1| 342|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 342
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AL139406-1|CAH73711.1| 315|Homo sapiens chromosome 10 open reading
frame 59 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
>AK002080-1|BAA92073.1| 315|Homo sapiens protein ( Homo sapiens
cDNA FLJ11218 fis, clone PLACE1008095. ).
Length = 315
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 583 CYGQNSTCLQKIGKKLIICVPHLAKTH 663
C N C +G + I C PH AK H
Sbjct: 47 CSPHNPQCTADLGAQYITCTPHYAKKH 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,404,124
Number of Sequences: 237096
Number of extensions: 1787236
Number of successful extensions: 3876
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3840
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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