Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22g08
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical pr...    31   0.84 
U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z68301-9|CAA92628.1|  456|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z68299-8|CAA92615.1|  456|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    28   5.9  

>U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical
           protein C18H2.4 protein.
          Length = 934

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
 Frame = +3

Query: 69  QKIIHKMVRITTYVFFDIETTGLPFQERNKTKI-------TELCFLAVSRDDL-DIQSGL 224
           + +I +++   T +F D+      + E+N  KI       ++    AVSR+D+  + +G 
Sbjct: 71  RNVITELLEANTVLFSDL----FNYDEKNLLKILTHISEESKKLVNAVSREDVVKVSNGT 126

Query: 225 PPIKKLSFVLNPEKKIHP----DVVV-LTGLTNESLKNAPTFKQRANAIVSFLNELPKPI 389
             +  L  +++  + IH     D+VV L GL  +S     T       I +FL    K I
Sbjct: 127 EWLNTLKGLVSTFEDIHQINKIDIVVFLNGLYGDSFAKKAT-SCNDTVIETFLM-FYKVI 184

Query: 390 CLVAHNGNS----------FDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSL 539
              AHN N            D +  L EC D      S  + I + + F   L+ T KSL
Sbjct: 185 RSAAHNTNGTLVKESINTFLDLETELFECLDNISSYKSIFIPIVTRLNFFTALEKTIKSL 244

Query: 540 PLKMNTSKDDSASEL 584
             K+   KD++ ++L
Sbjct: 245 NSKIPNKKDEAVTKL 259


>U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical
           protein W05H9.2 protein.
          Length = 851

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 573 ASELLWPELDVSTENWEEIDNLCASFSK-DTCIDDEKSKK 689
           A+ELLWP++D       ++  +CA  S  D  +D EK K+
Sbjct: 542 AAELLWPKIDGVMFQLNKVPGICAFVSNFDDHVDREKVKE 581


>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
           protein C25F9.2 protein.
          Length = 1469

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +3

Query: 393 LVAHNGNSFDYKILLAECN-DAGI 461
           +VAHNG S+D+ +LLAE +  AGI
Sbjct: 711 IVAHNGGSYDHVMLLAELDRQAGI 734


>Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical
           protein F17B5.1a protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
 Frame = +3

Query: 264 KKIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLA- 440
           K+IH ++           K   +FK R    V FLN   + I ++    + F YK+  A 
Sbjct: 93  KEIHLELKSSKNKYEGLRKKIASFKGRQQKAVGFLNSGLEEIRILTSPNDKFCYKVKNAS 152

Query: 441 -ECN-DAGILLPSDLLCIDSLIGFRKILKTT 527
             C+ D  I L    L  + LIG  K ++ T
Sbjct: 153 WRCSVDNSIDLQKIKLICEKLIGLEKKMEVT 183


>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 67  SKRSSIKWFELQLTYFSTSKQQVCRFKKEIKLKSPNYVF 183
           SK++         TYF++   Q+ RF  +I  K PN+ F
Sbjct: 305 SKKTKFLQKNGNFTYFTSKNSQIYRFSAQIPPKIPNFSF 343


>Z68301-9|CAA92628.1|  456|Caenorhabditis elegans Hypothetical
           protein T04B2.5 protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +3

Query: 519 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 695
           + + K + ++++   D    +++W  L   TEN  EID L     K      E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453


>Z68299-8|CAA92615.1|  456|Caenorhabditis elegans Hypothetical
           protein T04B2.5 protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +3

Query: 519 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 695
           + + K + ++++   D    +++W  L   TEN  EID L     K      E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 459 ILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS 560
           I LPS +L I ++ G+  + K T+ S PL+M+++
Sbjct: 45  IQLPSGILLIKTVFGYTTMGKNTKWSKPLEMDST 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,613
Number of Sequences: 27780
Number of extensions: 330446
Number of successful extensions: 919
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)