Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22f23
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing...    34   1.2  
UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;...    32   3.6  
UniRef50_Q75C32 Cluster: ACR085Cp; n=1; Eremothecium gossypii|Re...    32   3.6  
UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_Q2QTZ6 Cluster: Transposon protein, putative, CACTA, En...    32   4.8  
UniRef50_Q8F767 Cluster: MFS permease; n=4; Leptospira|Rep: MFS ...    31   6.3  
UniRef50_Q6FB37 Cluster: Putative transcriptional regulator; n=1...    31   6.3  
UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1; T...    31   6.3  
UniRef50_UPI000038295C Cluster: hypothetical protein Magn0300173...    31   8.3  
UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmi...    31   8.3  
UniRef50_Q7QQZ1 Cluster: GLP_442_21022_14681; n=1; Giardia lambl...    31   8.3  
UniRef50_A0EFF6 Cluster: Chromosome undetermined scaffold_93, wh...    31   8.3  

>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
           protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
           domain-containing protein 13B. - Takifugu rubripes
          Length = 634

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 147 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 260
           PSC F  PP  TVL    R  L++++  LL  +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543


>UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;
           n=1; Mycobacterium sp. JLS|Rep: Transcriptional
           regulator, TetR family - Mycobacterium sp. (strain JLS)
          Length = 236

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +3

Query: 165 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSF 320
           TP   TVL+D I  VLKD+ TA+LS S+        I R  V    + S+ +
Sbjct: 155 TPKLSTVLHDAIEPVLKDS-TAVLSGSVTLDEVVDLIVRMAVSHYFMPSNDY 205


>UniRef50_Q75C32 Cluster: ACR085Cp; n=1; Eremothecium gossypii|Rep:
           ACR085Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 954

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +3

Query: 21  VMATNQAIIDYKVKIADDNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYD 194
           V + +++I  Y+ +  DD+L+ +KE  L + S     +++FD     ST     ++YD
Sbjct: 638 VASADRSITKYRFEYTDDDLLIYKEKILSIKS-APINIHLFDDRFLISTNDKQLLIYD 694


>UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1;
            Magnaporthe grisea|Rep: Putative uncharacterized protein
            - Magnaporthe grisea (Rice blast fungus) (Pyricularia
            grisea)
          Length = 4052

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = +3

Query: 186  LYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFG 365
            LY  +     + +T  L   + ASLPS +++  L+   H++ DSF + +    L+    G
Sbjct: 2664 LYHELHHAQFNLETGELVKMVLASLPSGQVHHLLIGYHHINMDSFSMAILMSELLQLYAG 2723

Query: 366  LLVSSRS 386
             ++  R+
Sbjct: 2724 TVLEPRT 2730


>UniRef50_Q2QTZ6 Cluster: Transposon protein, putative, CACTA, En/Spm
            sub-class; n=2; Oryza sativa (japonica
            cultivar-group)|Rep: Transposon protein, putative, CACTA,
            En/Spm sub-class - Oryza sativa subsp. japonica (Rice)
          Length = 1391

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 72   DNLVTHKELALKVSS-IIG-TRVYVFDPS--CYFSTPPFDTVLYDNIRTVLKDNKTALLS 239
            DNL THKE    V   ++G     + DP    Y+        L  N+ +   D+++ +L+
Sbjct: 767  DNLTTHKEFIAAVQEQLMGFINEQILDPKGEFYYDGNTIHRCL-GNLTSTTPDSRSIILT 825

Query: 240  ASIQASLPSSEIYRQLVDSRHVSSDSFGVY 329
               +A LPSS +YRQ       S  + G++
Sbjct: 826  ---RALLPSSNLYRQCPSICARSDGAMGIF 852


>UniRef50_Q8F767 Cluster: MFS permease; n=4; Leptospira|Rep: MFS
           permease - Leptospira interrogans
          Length = 434

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 171 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLI 350
           PF  +   + R+ L    T  LS SIQ ++   ++Y     + HV        + S S+ 
Sbjct: 26  PFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLAEAIPSISMA 85

Query: 351 LHSFGLLVSSRSNKK 395
           L S GL++ S   KK
Sbjct: 86  LFS-GLVIDSFPRKK 99


>UniRef50_Q6FB37 Cluster: Putative transcriptional regulator; n=1;
           Acinetobacter sp. ADP1|Rep: Putative transcriptional
           regulator - Acinetobacter sp. (strain ADP1)
          Length = 466

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +3

Query: 135 YVFDPSCYFSTPPFDTVLYD-----NIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSR 299
           Y  D  C F   P DTVL D     N R +LK ++  ++S       P  E ++Q +   
Sbjct: 175 YSIDLICRFLLKPGDTVLLDDPCYFNFRALLKVHQVKVISVRYTPDGPDIEAFKQAIIEH 234

Query: 300 H 302
           H
Sbjct: 235 H 235


>UniRef50_A2DV13 Cluster: PolyA polymerase family protein; n=1;
           Trichomonas vaginalis G3|Rep: PolyA polymerase family
           protein - Trichomonas vaginalis G3
          Length = 454

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
 Frame = +3

Query: 6   LIEDVVMATNQAIIDYKVKIADD--NLVTHKEL----ALKVSSII---GTRVYVFDPSCY 158
           L ED++ +   A  +Y+VK+  +  NL   K L    A K  + I   G    VFDPS  
Sbjct: 207 LHEDIIPSAASARSEYEVKVTAERANLEITKALEGPLAYKYVTWIAEAGMFQSVFDPSKS 266

Query: 159 FSTPPFDTVLYDNI--RTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGV 326
           FS  PF+      +  R + ++  T LL++  Q  + + +I   +  ++ V +  F V
Sbjct: 267 FSIDPFEAAKRVKLSERNLTEEKSTVLLASIFQPLMTAPKIKDTVRKNQMVPAVEFAV 324


>UniRef50_UPI000038295C Cluster: hypothetical protein Magn03001734;
           n=1; Magnetospirillum magnetotacticum MS-1|Rep:
           hypothetical protein Magn03001734 - Magnetospirillum
           magnetotacticum MS-1
          Length = 101

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -2

Query: 338 RFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKS 228
           R +   KG+GR ++R  Q+A DLG R   L R ++++
Sbjct: 16  RLWRSVKGLGRELSRASQVAGDLGARADELARAQQEA 52


>UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmic
           phosphonate-binding protein precursor; n=23;
           Proteobacteria|Rep: Phosphonate ABC transporter,
           periplasmic phosphonate-binding protein precursor -
           Marinomonas sp. MWYL1
          Length = 347

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 231 LLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFG 365
           +LS    A+  +S++++++VD++ VS D F +   S      SFG
Sbjct: 214 VLSGDYDAAPVASDVFKRMVDAKRVSKDDFRIIYTSPRFPTSSFG 258


>UniRef50_Q7QQZ1 Cluster: GLP_442_21022_14681; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_442_21022_14681 - Giardia lamblia
           ATCC 50803
          Length = 2113

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 22/92 (23%), Positives = 39/92 (42%)
 Frame = +3

Query: 42  IIDYKVKIADDNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDN 221
           ++D    +  D       L+L V  ++      + P   FS PP   +  +NI     D+
Sbjct: 442 LLDLFESVIQDEARLQTPLSLGVIDVLSMEKAEYKPKELFSKPPSRFLADENIPARSADS 501

Query: 222 KTALLSASIQASLPSSEIYRQLVDSRHVSSDS 317
           +  +LS +  AS  +    R L++S   S +S
Sbjct: 502 RPTILSRNACASGAAPRSLRSLLNSSDSSMNS 533


>UniRef50_A0EFF6 Cluster: Chromosome undetermined scaffold_93, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_93,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 184

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 24/87 (27%), Positives = 43/87 (49%)
 Frame = +3

Query: 132 VYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSS 311
           +Y     C FS   +D + Y N+R+ ++    A+L  +I+ SL  S+   Q++DS  +  
Sbjct: 21  IYSTQQKCRFSRNEYDFLYYINLRSKVQQILEAILK-NIKTSLKMSQ--NQILDSDSILG 77

Query: 312 DSFGVYVKS*SLILHSFGLLVSSRSNK 392
            S   Y K   L++  F L +  ++ K
Sbjct: 78  -STNSYDKCFYLLVQEFALKLLEKTVK 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,905,259
Number of Sequences: 1657284
Number of extensions: 6011003
Number of successful extensions: 17577
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17574
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)