Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22f17
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC087845-1|AAH87845.1| 300|Homo sapiens chromosome 18 open read... 116 1e-25
BC015178-1|AAH15178.2| 300|Homo sapiens chromosome 18 open read... 116 1e-25
AB073382-1|BAD38633.1| 257|Homo sapiens putative protein produc... 76 2e-24
AY598336-1|AAT06747.1| 240|Homo sapiens L17 protein. 95 3e-19
BC022199-1|AAH22199.2| 167|Homo sapiens C18orf10 protein protein. 94 5e-19
>BC087845-1|AAH87845.1| 300|Homo sapiens chromosome 18 open reading
frame 10 protein.
Length = 300
Score = 116 bits (278), Expect = 1e-25
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 18/193 (9%)
Frame = +1
Query: 7 VSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSIRV 186
V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +TW K + I+P+GS+ +
Sbjct: 37 VTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLD-EHIIPLGSMAI 95
Query: 187 NTLNEXXXXXXXXXXXXXXM------------TRQNTGPRPVLNTKSKVFELDICRYIGK 330
N++++ + +P +++S +FELD C GK
Sbjct: 96 NSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGK 155
Query: 331 VCLVYTGGS------WSIWLATREGAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMI 492
VCLVY G IW R W +L D+FT Y+R+ + HLGLP WQ AF + +
Sbjct: 156 VCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGIS 215
Query: 493 PWAEHHTCLKKRI 531
P A+ + K I
Sbjct: 216 PQAKQWFSMYKPI 228
>BC015178-1|AAH15178.2| 300|Homo sapiens chromosome 18 open reading
frame 10 protein.
Length = 300
Score = 116 bits (278), Expect = 1e-25
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 18/193 (9%)
Frame = +1
Query: 7 VSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSIRV 186
V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +TW K + I+P+GS+ +
Sbjct: 37 VTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLD-EHIIPLGSMAI 95
Query: 187 NTLNEXXXXXXXXXXXXXXM------------TRQNTGPRPVLNTKSKVFELDICRYIGK 330
N++++ + +P +++S +FELD C GK
Sbjct: 96 NSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGK 155
Query: 331 VCLVYTGGS------WSIWLATREGAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMI 492
VCLVY G IW R W +L D+FT Y+R+ + HLGLP WQ AF + +
Sbjct: 156 VCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGIS 215
Query: 493 PWAEHHTCLKKRI 531
P A+ + K I
Sbjct: 216 PQAKQWFSMYKPI 228
>AB073382-1|BAD38633.1| 257|Homo sapiens putative protein product
of HMFN0601 protein.
Length = 257
Score = 75.8 bits (178), Expect(2) = 2e-24
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +1
Query: 268 RPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATREGAWGWLADSFTHYFR 429
+P +++S +FELD C GKVCLVY G IW R W +L D+FT Y+R
Sbjct: 92 KPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYR 151
Query: 430 MALVHLGLPGWQAAFANLPMIPWAEHHTCLKKRI 531
+ + HLGLP WQ AF + + P A+ + K I
Sbjct: 152 LLITHLGLPQWQYAFTSYGISPQAKQWFSMYKPI 185
Score = 56.8 bits (131), Expect(2) = 2e-24
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +1
Query: 7 VSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILP 168
V++ + P +R +S+WEQ+++ V+PED++NFY ++GF +TW K A + P
Sbjct: 37 VTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLDASDDQP 90
>AY598336-1|AAT06747.1| 240|Homo sapiens L17 protein.
Length = 240
Score = 95.1 bits (226), Expect = 3e-19
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Frame = +1
Query: 79 LPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSIRVNTLNEXXXXXXXXXXXXXXM---- 246
+PED++NFY ++GF +TW K + I+P+GS+ +N++++
Sbjct: 1 MPEDVKNFYLMTNGFHMTWSVKLD-EHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLA 59
Query: 247 --------TRQNTGPRPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATRE 384
+ +P +++S +FELD C GKVCLVY G IW R
Sbjct: 60 DLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRA 119
Query: 385 GAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMIPWAEHHTCLKKRI 531
W +L D+FT Y+R+ + HLGLP WQ AF + + P A+ + K I
Sbjct: 120 LYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFSMYKPI 168
>BC022199-1|AAH22199.2| 167|Homo sapiens C18orf10 protein protein.
Length = 167
Score = 94.3 bits (224), Expect = 5e-19
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Frame = +1
Query: 79 LPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSIRVNTLNEXXXXXXXXXXXXXXM---- 246
+PED++NFY ++GF +TW K + I+P+GS+ +N++++
Sbjct: 1 MPEDVKNFYLMTNGFHMTWSVKLD-EHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLA 59
Query: 247 --------TRQNTGPRPVLNTKSKVFELDICRYIGKVCLVYTGGS------WSIWLATRE 384
+ +P +++S +FELD C GKVCLVY G IW R
Sbjct: 60 DLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRA 119
Query: 385 GAWGWLADSFTHYFRMALVHLGLPGWQAAFANLPMIPWAE 504
W +L D+FT Y+R+ + HLGLP WQ AF + + P A+
Sbjct: 120 LYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAK 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,868,744
Number of Sequences: 237096
Number of extensions: 2474385
Number of successful extensions: 4487
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4482
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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