Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22f17
         (804 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069203-1|AAL39348.1|  290|Drosophila melanogaster GH25848p pro...   101   9e-22
AE014296-2074|AAF49975.1|  290|Drosophila melanogaster CG6931-PA...   101   9e-22
AF101361-1|AAD17897.1|  646|Drosophila melanogaster Abnormal X s...    29   7.4  
AE014298-2448|ABC67187.1|  255|Drosophila melanogaster CG9703-PB...    29   7.4  
AE014298-2447|AAF48644.1|  646|Drosophila melanogaster CG9703-PA...    29   7.4  

>AY069203-1|AAL39348.1|  290|Drosophila melanogaster GH25848p
           protein.
          Length = 290

 Score =  101 bits (243), Expect = 9e-22
 Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
 Frame = +1

Query: 4   NVSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSI- 180
           NV++ERR P +   L NWEQRH   LPED++ FY SSDGF L W Y+Y+ ++I  VG I 
Sbjct: 32  NVTLERRQPLNACQLVNWEQRHCVYLPEDMKKFYLSSDGFILNWSYQYAPNDIRRVGHIH 91

Query: 181 -----RVNTLNEXXXXXXXXXXXXXXMTRQNTG-----------PRPVLNTKSK------ 294
                +V  L E              +   N+            P P+   K K      
Sbjct: 92  FPHLLQVTLLRENIETTSSHSSNSTAVPNSNSDVVGAAGSSQSLPAPIATGKDKWGNATP 151

Query: 295 -------VFELDICRYIGKVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMALV 441
                  +FE++    + KVC++Y   S +      L     +W +LAD+F+ Y RMA+ 
Sbjct: 152 IITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAIA 211

Query: 442 HLGLPGWQAAFANLPMIPWAE 504
           HLGLP W+  F+   +  W E
Sbjct: 212 HLGLPYWELCFSTCGLPSWTE 232


>AE014296-2074|AAF49975.1|  290|Drosophila melanogaster CG6931-PA
           protein.
          Length = 290

 Score =  101 bits (243), Expect = 9e-22
 Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
 Frame = +1

Query: 4   NVSVERRAPCDRVALSNWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILPVGSI- 180
           NV++ERR P +   L NWEQRH   LPED++ FY SSDGF L W Y+Y+ ++I  VG I 
Sbjct: 32  NVTLERRQPLNACQLVNWEQRHCVYLPEDMKKFYLSSDGFILNWSYQYAPNDIRRVGHIH 91

Query: 181 -----RVNTLNEXXXXXXXXXXXXXXMTRQNTG-----------PRPVLNTKSK------ 294
                +V  L E              +   N+            P P+   K K      
Sbjct: 92  FPHLLQVTLLRENIETTSSHSSNSTAVPNSNSDVVGAAGSSQSLPAPIATGKDKWGNATP 151

Query: 295 -------VFELDICRYIGKVCLVYTGGSWS----IWLATREGAWGWLADSFTHYFRMALV 441
                  +FE++    + KVC++Y   S +      L     +W +LAD+F+ Y RMA+ 
Sbjct: 152 IITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAIA 211

Query: 442 HLGLPGWQAAFANLPMIPWAE 504
           HLGLP W+  F+   +  W E
Sbjct: 212 HLGLPYWELCFSTCGLPSWTE 232


>AF101361-1|AAD17897.1|  646|Drosophila melanogaster Abnormal X
           segregation protein.
          Length = 646

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 52  NWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILP 168
           NW  + + +  ED+RN++GSS G    +   Y+   I P
Sbjct: 189 NWNLKRTKLPIEDIRNYFGSSIGLYFGFIEFYTKALIFP 227


>AE014298-2448|ABC67187.1|  255|Drosophila melanogaster CG9703-PB,
           isoform B protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 52  NWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILP 168
           NW  + + +  ED+RN++GSS G    +   Y+   I P
Sbjct: 189 NWNLKRTKLPIEDIRNYFGSSIGLYFGFIEFYTKALIFP 227


>AE014298-2447|AAF48644.1|  646|Drosophila melanogaster CG9703-PA,
           isoform A protein.
          Length = 646

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 52  NWEQRHSAVLPEDLRNFYGSSDGFQLTWHYKYSADEILP 168
           NW  + + +  ED+RN++GSS G    +   Y+   I P
Sbjct: 189 NWNLKRTKLPIEDIRNYFGSSIGLYFGFIEFYTKALIFP 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,722,142
Number of Sequences: 53049
Number of extensions: 746304
Number of successful extensions: 1778
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)