Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22f09
(661 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 27 0.40
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 1.6
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 24 4.9
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.5
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.5
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 6.5
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 27.5 bits (58), Expect = 0.40
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 612 GDVTVHV*GTHFGRVVGFCLLP 547
G +TVH G +FG V F L P
Sbjct: 178 GSITVHAFGAYFGLAVSFMLRP 199
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.4 bits (53), Expect = 1.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 126 RQREGRCGVRDSTRCSFSRSQDQQF-IKSQSSRPSGRYR 239
RQRE +CG R S S R+ +++ I+++ +R R+R
Sbjct: 1064 RQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHR 1102
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 529 YITCK*RKQTKPNNPSKMGSLNVNRNVSDAFYRYKMPRICAK 654
++ C ++ KPN P +L + V A YR+ R C +
Sbjct: 391 FVVCVPVQRPKPNPPWADRTLKRLKRVKRAAYRHYQTRRCQR 432
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 280 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 309
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 280 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 309
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 280 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 309
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 279 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 308
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 279 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 308
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 280 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 309
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 348 SVMHPRRLAAVPPVATHRLLSAHSTDVSEY 259
S HP PP AT AH TD S Y
Sbjct: 280 STPHPTDPHCPPPGATLPNYWAHGTDCSRY 309
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 598 SRLRNPFWTGCWVLFAS 548
SR+ PF G W+L AS
Sbjct: 242 SRVETPFVIGVWILSAS 258
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,157
Number of Sequences: 2352
Number of extensions: 14405
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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