Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22f08
         (154 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   0.37 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   3.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   3.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   3.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    19   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   4.5  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 0.37
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 34  DFMLDSFLSICTNSKLNIL 90
           D  LD F  +CT +K  IL
Sbjct: 406 DITLDDFRGLCTGNKYPIL 424


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 1   ILNFIN*VDNNDFMLD 48
           +LN+I+ V NN+F  D
Sbjct: 227 VLNYIDEVFNNNFGYD 242


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 96   TNYHVIIILENK 131
            T YH+ I+ EN+
Sbjct: 965  TTYHIRIVAENE 976


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 22  VDNNDFMLDSFLSICTNSKLNILHVLTTM*LSFWKIKNSQ 141
           V NN+F   S ++ C+   L+ L   T   +  W +  S+
Sbjct: 101 VSNNNFKTYSNVTTCSYYSLDDLSEDTFYDIRLWGVSFSK 140


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 87  LACTNYHVIII 119
           L C NY+VI++
Sbjct: 75  LYCFNYYVIVV 85


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 4/15 (26%), Positives = 12/15 (80%)
 Frame = -3

Query: 116 DNYMVVSTCKIFNLE 72
           +N + ++ C++FN++
Sbjct: 336 ENKIEITACRLFNID 350


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 73  SKLNILHVLTTM*LSF 120
           +KLN+LH+  T  +SF
Sbjct: 245 AKLNVLHLHLTDAVSF 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,864
Number of Sequences: 336
Number of extensions: 281
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 31
effective length of database: 112,169
effective search space used:  2131211
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)