Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22f08
         (154 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0954 - 8016804-8016905,8017409-8017469,8017543-8017649,801...    25   8.3  
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727...    25   8.3  

>07_01_0954 -
           8016804-8016905,8017409-8017469,8017543-8017649,
           8018278-8018382,8018460-8018546,8018631-8018711,
           8018872-8018944,8019288-8019400,8019695-8019788,
           8020060-8020115,8020212-8020295,8020384-8020476,
           8020592-8020765,8020956-8021099,8021225-8021380
          Length = 509

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 40  MLDSFLSICTNSKLNILHVLT 102
           ++D  +S C NSK+N ++VLT
Sbjct: 109 LIDIPMSNCINSKINKIYVLT 129


>02_02_0155 +
           7272563-7272630,7272934-7273031,7273491-7274057,
           7275121-7276085,7276201-7276388,7276497-7276938
          Length = 775

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 153 FFFNLTIFYFPK 118
           FFF LTIFY P+
Sbjct: 205 FFFGLTIFYLPE 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,204,121
Number of Sequences: 37544
Number of extensions: 17980
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 14,793,348
effective HSP length: 31
effective length of database: 13,629,484
effective search space used: 258960196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)