Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22f06
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal... 111 2e-24
BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein. 111 2e-24
BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal... 111 2e-24
BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal... 111 2e-24
AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal... 111 2e-24
AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens ... 111 2e-24
AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal... 109 7e-24
BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein. 81 3e-15
CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein. 40 0.007
BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase (ubi... 40 0.007
AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone oxidore... 40 0.007
AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase (ubi... 40 0.007
U04810-1|AAA79333.2| 778|Homo sapiens tastin protein. 29 9.3
BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated pr... 29 9.3
AK223086-1|BAD96806.1| 413|Homo sapiens zinc finger, DHHC domai... 29 9.3
>BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein.
Length = 164
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 164
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 168
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 11 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 70
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 71 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 129
Query: 366 TFK 374
T K
Sbjct: 130 TNK 132
>AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 261
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 184
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ38237 fis, clone FCBBF2005637. ).
Length = 215
Score = 111 bits (266), Expect = 2e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG W PF
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWHPF 133
Query: 366 TFK 374
T K
Sbjct: 134 TNK 136
>AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal
protein bMRP36a protein.
Length = 197
Score = 109 bits (262), Expect = 7e-24
Identities = 63/161 (39%), Positives = 92/161 (57%)
Frame = +3
Query: 6 LKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPV 185
L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+ R P
Sbjct: 15 LHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPR 74
Query: 186 IVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPF 365
+V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+QG WTP
Sbjct: 75 VVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSIQGQWTPS 133
Query: 366 TFKDPELNTAELPDVRFGSNNRLPATATEQLRLMFEKQKLD 488
P +A RF + +E+L + Q LD
Sbjct: 134 PTSRP--RSAGYAPERFRILPQPRCKHSEELPHQLQPQALD 172
>BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein.
Length = 145
Score = 81.0 bits (191), Expect = 3e-15
Identities = 40/95 (42%), Positives = 62/95 (65%)
Frame = +3
Query: 90 MRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 269
+R+F+E++++DF++ NPGVV+Y+ R P +V EY+NG S+H K+ EEI V+
Sbjct: 29 LREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYINGAVREESIHCKSVEEISTLVQ 88
Query: 270 LFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPFTFK 374
Q G + R+RK +T++PS+QG W PFT K
Sbjct: 89 KLADQSGLD-VIRIRKPFHTDNPSIQGQWHPFTNK 122
>CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein.
Length = 99
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +3
Query: 15 GVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVG 194
GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++ P +
Sbjct: 9 GVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWA 67
Query: 195 EYLNGDRLWMSVHNKTHEEIVKWVE 269
Y G + ++N + +++ + +E
Sbjct: 68 RYAFGQETNVPLNNFSADQVTRALE 92
>BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 2, 8kDa protein.
Length = 99
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +3
Query: 15 GVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVG 194
GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++ P +
Sbjct: 9 GVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWA 67
Query: 195 EYLNGDRLWMSVHNKTHEEIVKWVE 269
Y G + ++N + +++ + +E
Sbjct: 68 RYAFGQETNVPLNNFSADQVTRALE 92
>AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B8 protein.
Length = 99
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +3
Query: 15 GVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVG 194
GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++ P +
Sbjct: 9 GVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWA 67
Query: 195 EYLNGDRLWMSVHNKTHEEIVKWVE 269
Y G + ++N + +++ + +E
Sbjct: 68 RYAFGQETNVPLNNFSADQVTRALE 92
>AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex 2 protein.
Length = 99
Score = 39.9 bits (89), Expect = 0.007
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +3
Query: 15 GVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVG 194
GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++ P +
Sbjct: 9 GVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWA 67
Query: 195 EYLNGDRLWMSVHNKTHEEIVKWVE 269
Y G + ++N + +++ + +E
Sbjct: 68 RYAFGQETNVPLNNFSADQVTRALE 92
>U04810-1|AAA79333.2| 778|Homo sapiens tastin protein.
Length = 778
Score = 29.5 bits (63), Expect = 9.3
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +2
Query: 203 ERGQIVDERPQQNPRGDRKMGRI---VPNSTRQ-QLELETPQVPVHEPPLGPRTLDSVHV 370
E+ ++ + P PR RI +P S+RQ QLE+ P P PL P T
Sbjct: 573 EQLEVPEPCPPAEPRPLESYCRIEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGP 632
Query: 371 QG--PRIEHG 394
G PR+E G
Sbjct: 633 PGPCPRVELG 642
>BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated
protein (tastin) protein.
Length = 778
Score = 29.5 bits (63), Expect = 9.3
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +2
Query: 203 ERGQIVDERPQQNPRGDRKMGRI---VPNSTRQ-QLELETPQVPVHEPPLGPRTLDSVHV 370
E+ ++ + P PR RI +P S+RQ QLE+ P P PL P T
Sbjct: 573 EQLEVPEPCPPAEPRPLESYCRIEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGP 632
Query: 371 QG--PRIEHG 394
G PR+E G
Sbjct: 633 PGPCPRVELG 642
>AK223086-1|BAD96806.1| 413|Homo sapiens zinc finger, DHHC domain
containing 6 variant protein.
Length = 413
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 122 INQILLYEVSHTTAGSVGFAKLEDYSLQLTHVSSYAIFQG 3
I+ +L Y HTT GSV F L ++++ + + A+F G
Sbjct: 40 IDSVLWYWPLHTTGGSVSFIMLINWTIMILYNYFNAMFAG 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,345,579
Number of Sequences: 237096
Number of extensions: 2037169
Number of successful extensions: 8704
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8690
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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