Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22f05
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-11|AAK72054.1|  224|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF067942-6|AAG45579.1|  345|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U97008-11|AAK72054.1|  224|Caenorhabditis elegans Hypothetical
           protein C03G6.5 protein.
          Length = 224

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 212 IHLLNSVKKVRPLPSTIKLWLKYFENKKHN-ESISSRNNCASKHTFSKRSYVLNLKLYCN 36
           + L +  +KV  L    K  LK F+    +  S  S  NC +K    K  YV ++K YC+
Sbjct: 75  VRLSDFAEKVDNLDMNDKTKLKEFKRSCDSLHSCYSNLNCTTKSDDEKDKYVESIKQYCD 134


>Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical
           protein F49A5.4 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 486 LVEGAQRGRQVSAFALETLNFVCGLARLTHD 394
           +  G Q G+  SA   ET++FVC L    +D
Sbjct: 157 MTNGTQAGKWASASCTETMSFVCELPATIYD 187


>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
            F46H5.4 protein.
          Length = 2018

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
 Frame = +1

Query: 64   YDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFN-KCIVSIKSSFEN 240
            +++  N+C EA     +  +L F +    +Q+L  + KG   F+E     I   K++F N
Sbjct: 1571 HEKQRNLC-EAAHSYLQASALVFEYIAQKDQNLSFESKGAATFSEITPNAIKESKTNF-N 1628

Query: 241  QANNTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPA 420
               N D+ +++++    F     IK + +   +++  Q Y    P   +      + K  
Sbjct: 1629 SLKNADSENHIQSYH--FTEAGVIKILEKAFALLEKAQLYELLFPFSKIILKYYHATKSY 1686

Query: 421  NKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGM 534
            +++     +    A  +    E  +N  D ++ P+ G+
Sbjct: 1687 SRVSHTHKRLGIAADQIKETGEYYENQSDAWISPLPGI 1724


>AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical
           protein C29F9.4 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/80 (22%), Positives = 34/80 (42%)
 Frame = +1

Query: 28  AYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNK 207
           AY+ + S+    +D FEN+ +      D++ S+   + K  +   +++    T   E   
Sbjct: 161 AYKRKKSVITEVFDEFENILWSVCSFSDKLTSIS-CYKKEMDPDCLIENVN-TLSNELEN 218

Query: 208 CIVSIKSSFENQANNTDNIH 267
               + + F     NTD IH
Sbjct: 219 -FEKVTAEFTKYLVNTDGIH 237


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
 Frame = -2

Query: 281 MFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIK--LW--LKYFENKKHNESI 114
           +F+ + +++++     KL   E    LN+  K + + + IK   W  L  FEN  + E I
Sbjct: 8   IFYFIFVIAIIPIVTEKLSLKENKERLNTCGKDKDIYNGIKNNRWHILAAFENGNNIEYI 67

Query: 113 SSRNNCASKHTFSKRSYVLNLKL 45
           SS +  +++H  +    +LN ++
Sbjct: 68  SSASLISNRHFITSAFSILNSQM 90


>AF067942-6|AAG45579.1|  345|Caenorhabditis elegans Hypothetical
           protein ZK6.4 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 56  LTRTTASKTCVLKRNCYEMKSI--RCVF 133
           +TRTT  K C L  NC+    I  +CVF
Sbjct: 36  ITRTTPVKKCYLGENCFTKTPITQKCVF 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,806,100
Number of Sequences: 27780
Number of extensions: 390700
Number of successful extensions: 1304
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)