BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22e12
(492 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 23 5.7
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 23 5.7
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 23 5.7
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 7.5
AF513635-1|AAM53607.1| 212|Anopheles gambiae glutathione S-tran... 23 7.5
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 7.5
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 23.0 bits (47), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 305 STKPQQSPSIKPTVFN 258
++ P Q P +KP VFN
Sbjct: 242 NSNPTQCPDLKPGVFN 257
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 5.7
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 452 LSHITIYITFVHYKHSFINSSIVHSITYSKTISSSF 345
L I + + Y + F N+ ++ +I Y K + F
Sbjct: 154 LQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYNPKF 189
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 5.7
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 452 LSHITIYITFVHYKHSFINSSIVHSITYSKTISSSF 345
L I + + Y + F N+ ++ +I Y K + F
Sbjct: 154 LQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYNPKF 189
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -2
Query: 452 LSHITIYITFVHYKHSFINSSIVHSITYSKTISSSF 345
L I + + Y + F N+ ++ +I Y K F
Sbjct: 154 LQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYDPKF 189
>AF513635-1|AAM53607.1| 212|Anopheles gambiae glutathione
S-transferase D4 protein.
Length = 212
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 29 LDFFTVINSYCFSNQLTLSDFC 94
L+ F SY ++QLT++D C
Sbjct: 135 LESFLYERSYTAADQLTVADIC 156
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -2
Query: 452 LSHITIYITFVHYKHSFINSSIVHSITYSKTISSSF 345
L I + + Y + F N+ ++ +I Y K F
Sbjct: 154 LQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYDPKF 189
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,199
Number of Sequences: 2352
Number of extensions: 7376
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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