Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22e09
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    33   0.004
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 32.7 bits (71), Expect = 0.004
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 399 SQLLVYNVTIHFIKIFCLILRCLRFYDLIIIF*-HLDY*NHL*CHYWFYF*-TYFCCEFV 572
           S  +++ + + F  +  ++L    FY   I+F  HL     L C Y+FY+    FCC F+
Sbjct: 217 SAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLL---LVCIYYFYYMHLLFCCAFI 273

Query: 573 AFVIRRYKVLVFY 611
            F +    +L  Y
Sbjct: 274 IFTMHLLFLLCIY 286


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 566 VCRICYSSVQSLS 604
           +C +CYS++Q +S
Sbjct: 925 ICHVCYSTIQEVS 937


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 528 HYWFYF*TYFCCEFVAFVI 584
           H +F+F    CC+F+A ++
Sbjct: 73  HIFFFF--AICCDFIALIV 89


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 414 YNVTIHFIKIFCLILRCL 467
           ++  I+ I+ FCL+ RCL
Sbjct: 375 FDCDINSIQYFCLMARCL 392


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 272 KSSSDCIAVQSGRVLTKNCRCRRDLV 195
           K++ +C+  +  R   K CR R+ L+
Sbjct: 43  KNNGECVINKKNRTACKACRLRKCLL 68


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +1

Query: 1   CSPNNINKFNNMICVK***GCRFECTINKFELFLRSKVATPATMRREFTTMPRS 162
           C P  I    N+   +      F+    KF+   ++KV TP T   E +  P+S
Sbjct: 111 CRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQS 164


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +1

Query: 1   CSPNNINKFNNMICVK***GCRFECTINKFELFLRSKVATPATMRREFTTMPRS 162
           C P  I    N+   +      F+    KF+   ++KV TP T   E +  P+S
Sbjct: 131 CRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQS 184


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 277 CKNPVPIASPYSPDAFLRKIVAAVAILCP 191
           C   +  A P     F+RK   A A +CP
Sbjct: 220 CSGTIDWALPNKRTVFIRKGGTAKASMCP 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,848
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)