Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22e09
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70782-8|CAA94845.2|  536|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>Z70782-8|CAA94845.2|  536|Caenorhabditis elegans Hypothetical
           protein R04B5.9 protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 161 DRGIVVNSRRIVAGVATLDRKNNSNLLIVHSKRHPHYHF 45
           D+G++  S   +A  +T+D+K   + L +  K+ P YHF
Sbjct: 295 DKGVIYFSLGTIANTSTIDKKVMESFLEI-VKKFPDYHF 332


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 65  VSNAQSTSSNCFYDPRSRRQRQCVENSQQCRDRC 166
           +++A S  S+C  D   R +++C  NSQ C  +C
Sbjct: 732 LNSAGSPDSSCHCDGPDREEKEC--NSQSCAPQC 763


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,988
Number of Sequences: 27780
Number of extensions: 365036
Number of successful extensions: 1169
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)