Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22d24
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical ... 34 0.10
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical ... 29 3.9
AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical ... 28 6.8
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 9.1
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 9.1
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 9.1
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 27 9.1
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 27 9.1
AC006607-5|AAF60371.2| 640|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical
protein K06H6.4 protein.
Length = 467
Score = 33.9 bits (74), Expect = 0.10
Identities = 32/108 (29%), Positives = 51/108 (47%)
Frame = +3
Query: 39 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDYLKLTPANYHFTTDQF 218
+R+ + E T++ YLD I +A + L RVK +++DNN TP Y D+
Sbjct: 276 ERLEIRNEQFKTVVDYLDSIHNASIANLRFRVKW-VIKDNN-------TPERYE--NDKQ 325
Query: 219 ICNYLGITDHPMTPYLVPLLSFGKASCAFFNKCIPEDVRIVTLNRPLT 362
I + + + T L F + C PE+V I+T++ PLT
Sbjct: 326 ITDEMLFHKYQNTSQLGNF--FDQPKCII----RPENVAIMTIHGPLT 367
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 31.1 bits (67), Expect = 0.73
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 475 FICTVDGVTQRSI*RSCSINFLANLYHKNCLDKKFSNDVNGRFNVTMRTSSGMHLLKNAQ 296
++ ++ +++ SI RS NFL + H+ L + + FN R + HL + Q
Sbjct: 31 YVKNIENISKESINRSVLNNFLETVVHQKSLPFEILRTMTDHFNYGPRLNFN-HLHQQQQ 89
Query: 295 L---ALPNESKGTKYG 257
L +P+E G K G
Sbjct: 90 LHSTIIPSEYLGDKSG 105
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 441 DRCVTPSTVQINLYDDNED-YLNCFDCCIVDCNINDMNRCP 560
D+ V + + DNE Y+N D + +C IN+ N CP
Sbjct: 754 DQSVCCGATDMGVCPDNEKAYINSMDGTVRECLINEHNSCP 794
>AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical
protein C14C6.8 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 39 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 173
+R+ + E T++ YLD I +A V L RVK + +N Y
Sbjct: 257 ERLEIRNEQFKTVVDYLDSIHNASVANLHFRVKWVMKHNNTPARY 301
>AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical
protein C14C6.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 39 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 173
+RI + E T+ YLD I ++ + L RVK L +N Y
Sbjct: 328 ERIEIRSENFKTVTSYLDSIHNSSISNLHFRVKWVLKHNNTPATY 372
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
ZK1067.1 protein.
Length = 1323
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +3
Query: 315 CIPED-VRIVTLNRPLTSLENFL 380
C+ +D ++IVT+ RPL +L+NFL
Sbjct: 953 CMHDDGLKIVTIYRPLGNLQNFL 975
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +3
Query: 315 CIPED-VRIVTLNRPLTSLENFL 380
C+ +D ++IVT+ RPL +L+NFL
Sbjct: 953 CMHDDGLKIVTIYRPLGNLQNFL 975
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +3
Query: 315 CIPED-VRIVTLNRPLTSLENFL 380
C+ +D ++IVT+ RPL +L+NFL
Sbjct: 1004 CMHDDGLKIVTIYRPLGNLQNFL 1026
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 258 PYLVPLLSFGKASCAFFNKCIPEDVRIVTLNRPLTSLENFLSKQF----LWYKLAR 413
PY + G+++C K I D +++NRP T + + F W K+ R
Sbjct: 9 PYAIEYAKSGRSNCKTCKKNIALDQLRMSMNRPSTFFDGNMDSWFHYNCFWIKMIR 64
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 258 PYLVPLLSFGKASCAFFNKCIPEDVRIVTLNRPLTSLENFLSKQF----LWYKLAR 413
PY + G+++C K I D +++NRP T + + F W K+ R
Sbjct: 9 PYAIEYAKSGRSNCKTCKKNIALDQLRMSMNRPSTFFDGNMDSWFHYNCFWIKMIR 64
>AC006607-5|AAF60371.2| 640|Caenorhabditis elegans Hypothetical
protein C09E7.4 protein.
Length = 640
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 351 RPLTSLENFLSKQFLWYKLARKLIEHERQMDRCVTPSTVQINLYDDNEDYLNCFDCCIVD 530
R +SL +FL + Y L+++ I + R + + L D +EDYL + C
Sbjct: 255 RNASSLSSFLVSEGKRYSLSKEEIRNIRVVGEGFS------ELKDIDEDYLQYYRLCSQK 308
Query: 531 CNINDMNRCPD 563
N +NRC D
Sbjct: 309 SIENAVNRCLD 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,522,537
Number of Sequences: 27780
Number of extensions: 294809
Number of successful extensions: 821
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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