Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22d21
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    27   0.41 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   3.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.8  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  GTVVSLERSASAPGFPLKCV 83
           G +  LER+ S PG P KCV
Sbjct: 60  GAIEELERALSCPGQPSKCV 79


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 SERSQKTPSSRSEVEINEELQR 179
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 SERSQKTPSSRSEVEINEELQR 179
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 SERSQKTPSSRSEVEINEELQR 179
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 SERSQKTPSSRSEVEINEELQR 179
           S+ S +TP S +++  NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 520 VCETCGRCRCEQCARPRPLPSRW 588
           VC +   C  E+ A+ R LPSRW
Sbjct: 553 VCASWPLCG-EKSAKKRKLPSRW 574


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 117  ERSQKTPSSRSEVEINEELQRGSGDDEGTGRRRP 218
            E  +K  +S+ ++ I+EEL     DDEG G   P
Sbjct: 1217 EGEEKRDASKEDLGIDEEL-----DDEGEGDEGP 1245


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,214
Number of Sequences: 2352
Number of extensions: 8716
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)