Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22d20
         (165 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p pro...    47   4e-06
AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA...    47   4e-06
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    28   2.0  

>AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p
           protein.
          Length = 190

 Score = 46.8 bits (106), Expect = 4e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 2   TTYSIFYXNALFLTIVILSXFYILRTFTPTVNYI 103
           TT+SIFY NA++L ++I   F+IL+  TP +NYI
Sbjct: 137 TTFSIFYNNAIYLAVIIFISFFILKNSTPFINYI 170


>AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA
           protein.
          Length = 190

 Score = 46.8 bits (106), Expect = 4e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 2   TTYSIFYXNALFLTIVILSXFYILRTFTPTVNYI 103
           TT+SIFY NA++L ++I   F+IL+  TP +NYI
Sbjct: 137 TTFSIFYNNAIYLAVIIFISFFILKNSTPFINYI 170


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 94    NCRCECTQNVEXAQDDNS-QEKCVXVEN*VCG 2
             NCR ECT N E A D      KCV     +CG
Sbjct: 18762 NCRPECTLNSECAYDKACVHHKCVDPCPGICG 18793



 Score = 25.8 bits (54), Expect = 8.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 94    NCRCECTQNVEXAQDDNSQ-EKCVXVEN*VCG 2
             NCR EC  + + AQ+ N Q +KCV      CG
Sbjct: 11059 NCRPECIISSDCAQNLNCQNQKCVDPCPGTCG 11090


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,939,597
Number of Sequences: 53049
Number of extensions: 99500
Number of successful extensions: 253
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)