Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22d18
         (279 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2; ...    35   0.40 

>UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 1432

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +3

Query: 6    NDVICLNSLYE*NSTC--KTQSRDDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQS 173
            NDV+C N++ E N+     TQS +D I    +N+ N+   FS++NSL   N++  T S
Sbjct: 978  NDVLCNNNIIESNANIHSNTQSVNDQI---SINMINENELFSRMNSLNNNNTSIDTNS 1032


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,530,161
Number of Sequences: 1657284
Number of extensions: 2585692
Number of successful extensions: 3304
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3296
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)