Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22d17
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 3e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 39 0.001
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 36 0.005
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 35 0.012
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 35 0.015
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 34 0.027
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 33 0.036
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 33 0.047
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 33 0.062
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 32 0.082
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 31 0.14
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.14
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 30 0.44
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.3
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 27 4.1
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 7.1
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 26 7.1
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 7.1
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 9.4
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 25 9.4
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 653 LYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRG 778
LYPL ++KT++Q+ + Y G D KI +EG LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRG 67
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 629 SSFTVRCALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGF 781
+ FT + P L+K ++Q + Y G D FTKI E + LY GF
Sbjct: 114 AGFTETFVVVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGF 164
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 626 MSSFTVRCALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGF 781
+S F V C + + T++ Q+ +E YK D K SEG LY+GF
Sbjct: 238 VSGFGVCCTMQIFDTVMTRMYNQKNKELYKNPIDCILKTIRSEGFFALYKGF 289
Score = 30.7 bits (66), Expect = 0.25
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +2
Query: 659 PLTLIKTQIQVQRR-------REAYKGVTDAFTKIYASEGVSGLYRG 778
P +IKT+ Q+Q + + YK V AF+ I EG+ GL RG
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRG 89
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 659 PLTLIKTQIQVQR------RREAYKGVTDAFTKIYASEGVSGLYRG 778
P L+KT++Q ++ YK + +AF++I GV GL+ G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 626 MSSFTVRCALYPLTLIKTQIQVQ---RRREAYKGVTDAFTKIYASEGVSGLYRG 778
+S T ++PL +I+T++Q Q Y G D F K +EG GLY+G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKG 397
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 644 RCALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRG 778
R A+ PL +K QVQ +E Y +T KI+ EG+ G +RG
Sbjct: 35 RTAVSPLERMKIIFQVQNNKE-YTSLTSTLVKIWNREGLIGFFRG 78
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 656 YPLTLIKTQIQVQRRR---EAYKGVTDAFTKIYASEGVSGLYRGF 781
+P +++ + QV R YK + A IY +EG++G +RG+
Sbjct: 245 FPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGY 289
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.015
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 644 RCALYPL-TLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGFWLS 790
+ ++P+ T++KT +Q YK D F IY + G+ GLYRG +S
Sbjct: 207 KAIMFPVDTVVKT---LQTFPSNYKSFKDCFLSIYRNSGIKGLYRGLSVS 253
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 33.9 bits (74), Expect = 0.027
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 710 YKGVTDAFTKIYASEGVSGLYRGF 781
+ G+ D + K Y S+G+ GLYRGF
Sbjct: 175 FNGLVDVYRKTYRSDGLRGLYRGF 198
Score = 29.9 bits (64), Expect = 0.44
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +2
Query: 611 FPLYTMSSFTVRCALYPLTLIKTQIQVQ-------RRREAYKGVTDAFTKIYASEGVSGL 769
F + +S+ + A P+ +K IQ Q R YKG+ + F + A EGV L
Sbjct: 31 FMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISL 90
Query: 770 YRG 778
+RG
Sbjct: 91 WRG 93
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 33.5 bits (73), Expect = 0.036
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 653 LYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGF 781
+YPL +I+T++QV R ++ + + + + +G+ G Y+GF
Sbjct: 204 MYPLLVIRTRLQVMR--SPHRSIMNLVLQTWRLQGILGFYKGF 244
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 33.1 bits (72), Expect = 0.047
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 629 SSFTVRCALYPLTLIKTQIQVQR--RREAYKGVTDAFTKIYASEGVSGLYRGF 781
+ + + A YP ++K++IQ + YK IY G+ G YRGF
Sbjct: 222 AGYAMWLAAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGF 274
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 659 PLTLIKTQIQVQRRREA-YKGVTDAFTKIYASEGVSGLYRGF 781
P+ ++ ++Q+Q + Y G D KI + G+SG+ +G+
Sbjct: 132 PVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGLSGIMKGY 173
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 659 PLTLIKTQIQVQRR-REAYKGVTDAFTKIYASEGVSGLYRG 778
P +K ++Q Q Y D KI +EG++ Y+G
Sbjct: 37 PFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKG 77
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 32.7 bits (71), Expect = 0.062
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 659 PLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGFWL 787
PL +IK + Q+ ++ V + + + SEG+ G YRG+W+
Sbjct: 103 PLEVIKARTQISQKGS----VINTISTLARSEGLKGFYRGYWM 141
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 707 AYKGVTDAFTKIYASEGVSGLYRGFWLS 790
AY DAF KIY EG++ YRG + S
Sbjct: 229 AYNNTFDAFRKIYKYEGLAAFYRGLFPS 256
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Frame = +2
Query: 659 PLTLIKTQIQVQR---------RREAYKGVTDAFTKIYASEGVSGLYRG 778
PL ++KT+ Q Q+ G + I+ +EG++GLYRG
Sbjct: 25 PLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRG 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 638 TVRCALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRG 778
T A+ PL LIK + QV Y G F I + EG+ GLY G
Sbjct: 36 TTHSAITPLDLIKCRKQVNPN--IYPGNIAGFKTILSKEGLRGLYTG 80
Score = 29.9 bits (64), Expect = 0.44
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 653 LYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRG 778
L P+ IK ++Q R A +A++KI +EG LYRG
Sbjct: 138 LCPMEAIKVRVQTSNPRFA-NTTREAWSKIVTNEGFGTLYRG 178
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 650 ALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGFWLSS 793
A P+T+IK ++ + +Y + + I+ EG+SG +RGF +++
Sbjct: 123 AFMPVTVIK--VRYESNLYSYTTIYSSIRDIWKKEGISGFFRGFGVTA 168
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 626 MSSFTVRCALYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGFWL 787
+S T P ++KT++Q++ YK + +YA+EG G GF+L
Sbjct: 219 ISGATATAITNPFDMLKTRVQLEPH--IYKNFLHSAKLVYANEGFRGFLDGFFL 270
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 653 LYPLTLIKTQIQVQR--RREAYKGVTDAFTKIYASEGVSGLYRG 778
+YP+ IKT++Q+ R + ++ KI ++EGV L+RG
Sbjct: 37 MYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRG 80
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 653 LYPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGV-SGLYRG 778
++ L +KT+ Q Y G+ ++ I EGV GLY G
Sbjct: 33 MHSLDTVKTRQQAALYTNKYNGMVKCYSTILCEEGVFHGLYSG 75
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 716 GVTDAFTKIYASEGVSGLYRGF 781
G+ +Y SEG+ GL+RGF
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGF 304
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 656 YPLTLIKTQIQVQRRREAYKGVTDAFTKIYASEGVSGLYRGFWL 787
YPL IK + Q + + F +EG+ GLYRG L
Sbjct: 36 YPLDSIKVRQQTYN----FPTIRSCFQNAVKNEGLKGLYRGLTL 75
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = -1
Query: 657 YRAQRTVKLLMVYNGKNLLLSIMLHSIVVIN*GGGVSTMVAAILDFPFVFSTFSSS 490
Y+ ++ + +++ + KNL + +H I ++ G+ FP FS+ S +
Sbjct: 168 YQEEKLIPAVLLSDDKNLSIKAAVHHIQSLSFSKGLEAASIVQTSFPSAFSSNSEN 223
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +2
Query: 545 VETPPPQLITTIEWSMMDKSKFFPLYTMSSFTVRCALYPLTLIKTQIQVQRRREAYKGVT 724
V P T E M + L+T S + C L +TL++ + +++ RE+ +
Sbjct: 748 VNESTPTFATNFETYTMVFQLSWILHTASDWKQGCRLRLITLVEFENEIEAERESMHQML 807
Query: 725 DAF 733
+ F
Sbjct: 808 ETF 810
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 49 NISKLLHKSFNNVHSVISEGFCDNIMNILLFIEYSLP 159
N+S L ++F+++ +I CDNI+ LL +Y++P
Sbjct: 391 NVSNDLFQAFDSIALIIFIPICDNIIYPLL-RKYNIP 426
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 626 MSSFTVRCALYPLTLIKTQIQVQ---RRREAYKGVTDAFTKIYASEGVSGLYRG 778
++ F YP +++T+++ Y G+ F ++ +G+ GLY G
Sbjct: 281 IAKFMAAGIAYPHEVVRTRLRQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGG 334
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 473 MLLSLWEEEKVEKTKGKSKMAATMVETPPPQLITTIEWS-MMDKSKFFPLYTMSSFTVRC 649
+L+S W T GKS A E P L W ++D++ + S C
Sbjct: 342 ILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSSKSALACC 401
Query: 650 AL 655
AL
Sbjct: 402 AL 403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,050,136
Number of Sequences: 5004
Number of extensions: 59401
Number of successful extensions: 164
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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