Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22d17
(795 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 39 5e-05
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 39 5e-05
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 4.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 4.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 39.1 bits (87), Expect = 5e-05
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 638 TVRCALYPLTLIKTQIQVQRRREA----YKGVTDAFTKIYASEGVSGLYRGFWLS 790
T C +YPL +T++ + + G+ + TKI+ ++G++GLYRGF +S
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVS 182
Score = 26.6 bits (56), Expect = 0.27
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +2
Query: 659 PLTLIKTQIQVQR------RREAYKGVTDAFTKIYASEGVSGLYRG 778
P+ +K +QVQ + YKG+ D F +I +G +RG
Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Score = 23.4 bits (48), Expect = 2.5
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 656 YPLTLIKTQIQVQRRREA----YKGVTDAFTKIYASEGVSGLYRG 778
YP ++ ++ +Q R YK + IY +EG + ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 39.1 bits (87), Expect = 5e-05
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 638 TVRCALYPLTLIKTQIQVQRRREA----YKGVTDAFTKIYASEGVSGLYRGFWLS 790
T C +YPL +T++ + + G+ + TKI+ ++G++GLYRGF +S
Sbjct: 128 TSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVS 182
Score = 26.6 bits (56), Expect = 0.27
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +2
Query: 659 PLTLIKTQIQVQR------RREAYKGVTDAFTKIYASEGVSGLYRG 778
P+ +K +QVQ + YKG+ D F +I +G +RG
Sbjct: 30 PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Score = 23.4 bits (48), Expect = 2.5
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 656 YPLTLIKTQIQVQRRREA----YKGVTDAFTKIYASEGVSGLYRG 778
YP ++ ++ +Q R YK + IY +EG + ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 454 NFNNTNVFGNYFFKKKLFCQIN 389
N+NN N NY KKL+ IN
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNIN 114
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 469 LISSINFNNTNVFGNYFFKKKLFCQIN 389
+ISS N+N N NY KK + IN
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNIIN 329
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 469 LISSINFNNTNVFGNYFFKKKLFCQIN 389
+ISS N+N N NY KK + IN
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNIIN 340
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 13 PFELFFHSVIN*NISKLLHKSFNNVHSVISEGF 111
PFE HS + LL N+V+ + S+GF
Sbjct: 104 PFEKRLHSRLPGRNFNLLRADANSVNELESQGF 136
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 469 LISSINFNNTNVFGNY-FFKKKLFCQINKLFNLYLIQI 359
L ++ N+NN N NY + KKL+ + N + N+ I +
Sbjct: 318 LSNNYNYNNNNYKYNYNNYNKKLYYK-NYIINIEQIPV 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,212
Number of Sequences: 438
Number of extensions: 4334
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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