Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22d08
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.016
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.016
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.016
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 35 0.066
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 35 0.066
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 34 0.088
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 32 0.35
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 32 0.35
AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical... 32 0.35
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 32 0.47
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.4
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 30 1.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.5
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 23 6.4
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 23 6.5
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 23 6.5
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 23 6.5
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 23 6.5
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 28 7.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 7.6
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 28 7.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 7.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +1
Query: 343 GQGQRPAPMPIRPPAGGQFPPMTGQRPPSATGQALTAQEGFETQRXXXXXXXXXXXXXGI 522
G G P P P AG PP TG PP TG G G
Sbjct: 251 GSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 523 --SGQLPPHSKGGFPYQPIPVRPGMPPNQP 606
+G LPP GG P P G PP P
Sbjct: 307 PPTGSLPPPQAGG---SPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +1
Query: 343 GQGQRPAPMPIRPPAGGQFPPMTGQRPPSATGQALTAQEGFETQRXXXXXXXXXXXXXGI 522
G G P P P AG PP TG PP TG G G
Sbjct: 272 GSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 523 --SGQLPPHSKGGFPYQPIPVRPGMPPNQP 606
+G LPP GG P P G PP P
Sbjct: 328 PPTGSLPPPQAGG---SPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +1
Query: 343 GQGQRPAPMPIRPPAGGQFPPMTGQRPPSATGQALTAQEGFETQRXXXXXXXXXXXXXGI 522
G G P P P AG PP TG PP TG G G
Sbjct: 257 GSGSPPPP----PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 523 --SGQLPPHSKGGFPYQPIPVRPGMPPNQP 606
+G LPP GG P P G PP P
Sbjct: 313 PPTGSLPPPQAGG---SPPPAGTGSPPPPP 339
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 34.7 bits (76), Expect = 0.066
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +3
Query: 318 SSTTKFWTRARSTASSNAD*TTCGRTIPS-----NDRTETSFCNRTGTNSPRRI*NSATS 482
S +T T +ST+S TT G T S ++RT ++ + T+ P S S
Sbjct: 479 SGSTVSTTSGQSTSSGTTKSTTSGPTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVS 538
Query: 483 KSAHA------TYESTTGYIWSIATSF*GWFSISTYTGAARNATKSTYSWNGCSTWSSPS 644
+ A T +T+G S S ++ST +G + + ST S G ST +S S
Sbjct: 539 TTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTS--GPST-TSGS 595
Query: 645 ARSGNAGPSTISVK 686
+S +GPST S K
Sbjct: 596 TKSTTSGPSTTSGK 609
Score = 33.5 bits (73), Expect = 0.15
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Frame = +3
Query: 303 TATSWSSTTKFWTRARSTASSNAD*--TTCGRTIPSNDRTETSFCNRTGTNSPRRI*NSA 476
+ TS STT T + ++++S T+ G T+ + TS T S +S
Sbjct: 450 STTSGPSTTPGSTISTTSSASTTSGPSTSSGSTVSTTSGQSTSSGTTKSTTSGPTT-SSG 508
Query: 477 TSKSAHATYESTTGYIWSIATSF*GWFSISTYTGAARNATKSTYSWNGCSTWSSPSARSG 656
S + T +T+G + S ++ST GA+ + + + +G ST S PS S
Sbjct: 509 PSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTASR 568
Query: 657 N-----AGPSTIS 680
+ +GPST S
Sbjct: 569 STVSTTSGPSTTS 581
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 34.7 bits (76), Expect = 0.066
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +1
Query: 352 QRPAPMPIRPPAGGQFPPMTGQRPPSATGQALTAQEGFETQ--RXXXXXXXXXXXXXGIS 525
+RP+ RP P RPPSA +A Q +E + S
Sbjct: 52 ERPSTASSRPRTSTGRAPSARARPPSAM-RAPPPQPTYENRPTTGMSMRNGGPPVPPSRS 110
Query: 526 GQLP-PHSKGGFPYQPIPV-RPGMPPNQPT 609
G +P P S+ G P P+PV R G PP PT
Sbjct: 111 GMIPVPPSRSGGPPAPMPVSRAGGPPRAPT 140
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 34.3 bits (75), Expect = 0.088
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Frame = +1
Query: 358 PAPM-PIRPPAGGQFPPMTGQRPPSATG-QALTAQEGFETQRXXXXXXXXXXXXXG---- 519
P+P P++PP G PPM G PP QA AQ + Q+ G
Sbjct: 130 PSPGGPMQPPHGFAPPPMGGGVPPEMMNHQAYQAQMRQQQQQPNGQAPPPVYPPFGQPAP 189
Query: 520 -ISGQLPPHSKGGFPYQPIPVRPGMPPNQP 606
+SGQ P+ +P Q +P PG PP P
Sbjct: 190 QMSGQRMPYP---YPPQGMPGYPGGPPPPP 216
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 346 QGQRP---APMPIRPPAGGQFPPMTGQRPP 426
Q Q+P AP P+ PP G P M+GQR P
Sbjct: 168 QQQQPNGQAPPPVYPPFGQPAPQMSGQRMP 197
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 32.3 bits (70), Expect = 0.35
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 303 TATSWSSTTKFWTRARSTASSNAD*TTCGRTIPSNDRTETSFCNRTGTNSPRRI*NSATS 482
++TS S++T T A ST +S T IP+ T T T T+ + TS
Sbjct: 213 SSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTS--TTVTS 270
Query: 483 KSAHATYESTTGYIWSIATSF*GWFSISTYT-GAARNATKSTYSWNGCSTWSSPS 644
+ T TT + ++ S +T T + + T TYS N S+ +SP+
Sbjct: 271 TTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPT 325
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 32.3 bits (70), Expect = 0.35
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 303 TATSWSSTTKFWTRARSTASSNAD*TTCGRTIPSNDRTETSFCNRTGTNSPRRI*NSATS 482
++TS S++T T A ST +S T IP+ T T T T+ + TS
Sbjct: 195 SSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTS--TTVTS 252
Query: 483 KSAHATYESTTGYIWSIATSF*GWFSISTYT-GAARNATKSTYSWNGCSTWSSPS 644
+ T TT + ++ S +T T + + T TYS N S+ +SP+
Sbjct: 253 TTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPT 307
>AL132948-10|CAC51066.1| 366|Caenorhabditis elegans Hypothetical
protein Y39B6A.11 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 358 PAPMPIRPPAGGQFPPMTGQRPPSATGQALTAQ 456
P P+ PP Q PP+ Q PP+++ L AQ
Sbjct: 255 PPTEPVAPPTSTQAPPIAAQAPPTSSVSNLLAQ 287
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.9 bits (69), Expect = 0.47
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Frame = +3
Query: 279 TRIQYPSYTATSWSSTTKFWTRARSTASSNAD*TTCG--RTIPSNDRTETSFCNRTGTNS 452
T I P +++ SS K T +SS T+ + S+ ETS + T +S
Sbjct: 328 TTITTPMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQSS 387
Query: 453 PRR---I*NSATSKSAHATYESTTGYIWSIATSF*GWFSISTY-TGAARNATKSTYSWNG 620
P + S+T S T +T ++ G S ST+ T + T + ++
Sbjct: 388 PASTSTVPESSTVGSTPTTGLTTLSTNEQSTSTSSGGHSTSTFGTTSETPETSTDFTATS 447
Query: 621 CSTWSSPSARSGNAGPSTISVKFYTNRNTSA 713
S+ S S +S NA STI T TSA
Sbjct: 448 TSSSSDSSTQSSNAQTSTIENGSTTTNFTSA 478
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 303 TATSWSSTTKFWTRARSTASSNAD*TTCGRT-IPSNDRTE 419
T TS S +T WT A +T ++ A T G+T IP+ DR E
Sbjct: 611 TTTSRSCSTTIWTTATTTPATAAT-TPAGQTPIPTKDRQE 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/98 (26%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Frame = +1
Query: 334 FGPGQGQRPAPMPIRPPAGGQF------PPMTGQRPPSATGQALTAQEGFETQRXXXXXX 495
+GP RP P PP G + PP G P ++ QR
Sbjct: 736 YGPPGAMRP-PAGFAPPPGAPYGYPPGAPPPAGFHPSHPQHPQHAQYLAWQQQRYHQQQQ 794
Query: 496 XXXXXXXGI-SGQLPPHSKGGFPYQPIPVRPGMPPNQP 606
G G PP+ G P P P + MPP P
Sbjct: 795 HQQQQQQGAPGGPRPPYPYPGGPVPPGPPQNRMPPPPP 832
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 337 GPGQ-GQRPAPMPIRPPAGGQFPP 405
GP Q G RP P+ PP GQ+PP
Sbjct: 141 GPSQQGYRPGPVTNGPPPQGQYPP 164
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 11/44 (25%)
Frame = +1
Query: 340 PGQGQRPAPM------PIRPP-----AGGQFPPMTGQRPPSATG 438
P GQ P PM P+ PP AG +PPM G PP+ G
Sbjct: 397 PSPGQYPGPMHYPGMPPMMPPGAPFSAGASYPPMGGPFPPNPYG 440
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.5
Identities = 38/157 (24%), Positives = 65/157 (41%)
Frame = +3
Query: 243 GTENAKHEHKWLTRIQYPSYTATSWSSTTKFWTRARSTASSNAD*TTCGRTIPSNDRTET 422
GT+ T + P +++ S+ + + + ASS+ +T G + P + T
Sbjct: 1456 GTQGTTQPGTIGTTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQPTVSST 1515
Query: 423 SFCNRTGTNSPRRI*NSATSKSAHATYESTTGYIWSIATSF*GWFSISTYTGAARNATKS 602
S + TG S S S+ ST G + +S + ST + +T S
Sbjct: 1516 SVPSSTGATS---------SGSSTTVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSS 1566
Query: 603 TYSWNGCSTWSSPSARSGNAGPSTISVKFYTNRNTSA 713
+ S + ST S PS+ + N G ST T + +S+
Sbjct: 1567 STSGSS-STQSIPSSTAANTGSSTSGPTVATTQGSSS 1602
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = +1
Query: 343 GQGQRPAPMPIRPPAGGQFPPMTGQRPPS-ATGQALTAQEGFETQRXXXXXXXXXXXXXG 519
G Q P P+G Q P MTGQ PPS Q T +G++
Sbjct: 4 GYSQASQQAPQGHPSGPQQPLMTGQYPPSQQKPQGYT--QGYQDSAQVPQGYP------- 54
Query: 520 ISGQLPPHSKGGFPYQP--IPVRPGMPPNQ 603
Q P + G+P QP P + PP Q
Sbjct: 55 -QSQQAPQAPQGYPQQPPQDPTQYAQPPQQ 83
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 340 PGQGQRPAPMPIRPPAG-GQFPPMTGQRPPS 429
PG G P P P P AG G +PP RPP+
Sbjct: 344 PG-GMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 340 PGQGQRPAPMPIRPPAG-GQFPPMTGQRPPS 429
PG G P P P P AG G +PP RPP+
Sbjct: 354 PG-GMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 343 GQGQRPAPMPIRPPAGGQFPPMTGQRPPSATG 438
G+G P P + P G PPM G PP G
Sbjct: 1464 GRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGG 1495
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 23.4 bits (48), Expect(2) = 6.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 520 ISGQLPPHSKGGFPYQPIPVRPGMPP 597
+ GQ+PP G P + GMPP
Sbjct: 550 MQGQMPPSGMPGQMSNPNMMGSGMPP 575
Score = 23.0 bits (47), Expect(2) = 6.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 394 QFPPMTGQRPPS 429
+ PPM GQ PPS
Sbjct: 546 RMPPMQGQMPPS 557
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 520 ISGQLPPHSKGGFPYQPIPVRPGMPP 597
+ GQ+PP G P + GMPP
Sbjct: 513 MQGQMPPSGMPGQMSNPNMMGSGMPP 538
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 394 QFPPMTGQRPPS 429
+ PPM GQ PPS
Sbjct: 509 RMPPMQGQMPPS 520
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 520 ISGQLPPHSKGGFPYQPIPVRPGMPP 597
+ GQ+PP G P + GMPP
Sbjct: 513 MQGQMPPSGMPGQMSNPNMMGSGMPP 538
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 394 QFPPMTGQRPPS 429
+ PPM GQ PPS
Sbjct: 509 RMPPMQGQMPPS 520
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 520 ISGQLPPHSKGGFPYQPIPVRPGMPP 597
+ GQ+PP G P + GMPP
Sbjct: 499 MQGQMPPSGMPGQMSNPNMMGSGMPP 524
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 394 QFPPMTGQRPPS 429
+ PPM GQ PPS
Sbjct: 495 RMPPMQGQMPPS 506
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 520 ISGQLPPHSKGGFPYQPIPVRPGMPP 597
+ GQ+PP G P + GMPP
Sbjct: 500 MQGQMPPSGMPGQMSNPNMMGSGMPP 525
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 394 QFPPMTGQRPPS 429
+ PPM GQ PPS
Sbjct: 496 RMPPMQGQMPPS 507
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 458 SWAVSACPVAEGGLCPVIGG 399
+W +S CP EG LC + GG
Sbjct: 245 NWQISFCPADEGVLCALGGG 264
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 458 SWAVSACPVAEGGLCPVIGG 399
+W +S CP EG LC + GG
Sbjct: 245 NWQISFCPADEGVLCALGGG 264
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 349 GQRPAPMPIRPPAGGQFPPMTGQRPP 426
G R APMP P G PP G RPP
Sbjct: 775 GGRQAPMP--PRGGPGAPPPPGMRPP 798
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 349 GQRPAPMPIRPPAGGQFPPMTGQRPP 426
G R APMP P G PP G RPP
Sbjct: 775 GGRQAPMP--PRGGPGAPPPPGMRPP 798
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 204 LTIDVSILYSIVLLGARWIYR 142
+TI SILY +V+ G +W R
Sbjct: 46 VTIQASILYMVVVFGTKWFMR 66
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 349 GQRPAPMPIRPPAGGQFPPMTGQRPP 426
G R APMP P G PP G RPP
Sbjct: 775 GGRQAPMP--PRGGPGAPPPPGMRPP 798
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 204 LTIDVSILYSIVLLGARWIYR 142
+TI SILY +V+ G +W R
Sbjct: 46 VTIQASILYMVVVFGTKWFMR 66
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 349 GQRPAPMPIRPPAGGQFPPMTGQRPP 426
G R APMP P G PP G RPP
Sbjct: 775 GGRQAPMP--PRGGPGAPPPPGMRPP 798
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,658,430
Number of Sequences: 27780
Number of extensions: 320841
Number of successful extensions: 1249
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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