Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22d08
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.23 
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    25   0.94 
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    25   0.94 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          25   0.94 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          25   0.94 
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    25   0.94 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    25   0.94 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.6  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   3.8  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   3.8  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   5.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   5.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 373 IRPPAGGQFPPMTGQRPP 426
           +R PAGGQ PP  G   P
Sbjct: 401 VRSPAGGQLPPSAGAPMP 418


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 89  QIPVPVYYGNFPPRPIMVRPWVP 111


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 337 QIPAPVYYGNFPPRPIMVRPWVP 359


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 322 QIPVPVYYGNFPPRPIMVRPWVP 344


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 529 QLP-PHSKGGFPYQPIPVRPGMP 594
           Q+P P   G FP +PI VRP +P
Sbjct: 338 QIPVPVYYGNFPPRPIMVRPWVP 360


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 576 GAARNATKSTYSWNGCSTWSSPSARSGNAGPSTISVKFYTNRNTSA 713
           G+   +T +T +  G +T + P+A +   GP+T S    T+  T+A
Sbjct: 209 GSTDASTPATVTTTGATT-TLPAASATGTGPATPSAVVATSNATAA 253


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 PQKQFDQDMAQKMQNMNINGSQGFN 291
           PQ   D  + Q+ QN+ I  +QG N
Sbjct: 163 PQHHLDSRVIQEAQNIAIQNTQGKN 187


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 608 VG*FGGIPGRTGIG*YGKPP 549
           VG FGG  G  G+G  GK P
Sbjct: 19  VGGFGGFGGFGGLGGRGKCP 38


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 608 VG*FGGIPGRTGIG*YGKPP 549
           VG FGG  G  G+G  GK P
Sbjct: 19  VGGFGGFGGFGGLGGRGKCP 38


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 261 VLHFLCHVLIKLLLWPSRHLTIDVSILYSIVL 166
           ++ FLC ++  L       +T+ +SIL S+V+
Sbjct: 246 LISFLCVLVFYLPAEAGEKVTLGISILLSLVV 277


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = -3

Query: 570 RLIWKTTLRMRWQLTRYTLWLTHRW--HGLTW 481
           RL     L ++ Q+    +WL H W  H   W
Sbjct: 53  RLSQLIDLNLKDQILTTNVWLEHEWQDHKFQW 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,579
Number of Sequences: 438
Number of extensions: 4171
Number of successful extensions: 26
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)