Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22d06
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   2.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.5  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   4.7  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    24   6.2  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   8.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 397 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 284
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 208 SLLAREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 318
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 666 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 702



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 284 NGDATVLFVLTRVSETGLSGSRASND 207
           +GD T L  +T ++E+G+  S  S D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 208 SLLAREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 318
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 667 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 703



 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 284 NGDATVLFVLTRVSETGLSGSRASND 207
           +GD T L  +T ++E+G+  S  S D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 125 EYPQHVCDRPRRSRQVNPHGLVGFQGR-YHCWRE 223
           ++P HVC+R  R+  +N   +V   G  ++C R+
Sbjct: 350 QHPLHVCERFERASVINREEIVRKHGLCFNCLRK 383


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 110 DGQEAEYPQHVCDRPRRSRQVNPHG 184
           D   A   QH+  RP+RS + NP G
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNPAG 297


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 553 NRIGLMRSAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSA 437
           N +GL RS  A  S  SV    P +   T RAP    +A
Sbjct: 3   NALGLTRSMSADTSKTSVGKQLPASGIPTLRAPMAAGNA 41


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 505 SVCTHTPDTQSTTTRAPS 452
           SV  H PDT+ T  + PS
Sbjct: 135 SVIAHNPDTKRTRVKLPS 152


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 514 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST-CPGES 395
           +TV+  T T    +TTT AP+ T + A      +T  PG++
Sbjct: 34  TTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQT 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,527
Number of Sequences: 2352
Number of extensions: 18039
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)