Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22c23
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 80 3e-16
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 63 3e-11
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 58 1e-09
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 54 2e-08
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 52 6e-08
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 50 3e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 3e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 7e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 1e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 45 1e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 45 1e-05
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 44 2e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 44 3e-05
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.0
SPBC1271.05c |||zinc finger protein zf-AN1 type|Schizosaccharomy... 26 6.2
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 25 8.2
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 8.2
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 25 8.2
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 80.2 bits (189), Expect = 3e-16
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Frame = +3
Query: 90 RKSMLVYHKWSHSDEPKFKCET--CGKAFQHPNGLYFHRRWHTDLRPFSCPV--CPKAFL 257
R S+L H +HS+E F C+ C KAF + L H+R HT+++PFSC C F
Sbjct: 36 RPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFY 95
Query: 258 DKFGLERHLRCHTGEKPYRC--QLCDRAFSQSNSLKGHIQSVH 380
+ LERH+ H KPY C + CD FS+ L+ HI + H
Sbjct: 96 TQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 69.7 bits (163), Expect = 4e-13
Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +3
Query: 141 FKC--ETCGKAFQHPNGLYFHRRWHTDLRPFSCPV--CPKAFLDKFGLERHLRCHTGEKP 308
F C E CGK + P+ L H R H++ RPF C C KAF K L+ H RCHT KP
Sbjct: 23 FHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP 82
Query: 309 YRCQL--CDRAFSQSNSLKGHIQSVHLK-KPY 395
+ C CD F L+ HI+ VH K KPY
Sbjct: 83 FSCHYDGCDAQFYTQQHLERHIE-VHRKPKPY 113
Score = 41.5 bits (93), Expect = 1e-04
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Frame = +3
Query: 108 YHKWS----HSDEPKF-KCETCGKAFQHPNGLYFHRRWHT----DLRPFSCPV--CPKAF 254
+ KWS H E C CG+ F+ L H H + + + CP+ C K+F
Sbjct: 188 FEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSF 247
Query: 255 LDKFGLERHLRC-HTGEKPYRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
L++H+ H G + C C F + L+ H++ KK +
Sbjct: 248 TRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAH 295
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +3
Query: 102 LVYHKWSHSDEPKFKC--ETCGKAFQHPNGLYFHRRW-HTDLRPFSCPVCPKAFLDKFGL 272
+V H+ + + + C E C K+F + L H H F C C F K L
Sbjct: 223 VVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHML 282
Query: 273 ERHLR---CHTGEKPY 311
+RHL C KPY
Sbjct: 283 QRHLERGTCKKAHKPY 298
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 63.3 bits (147), Expect = 3e-11
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +3
Query: 156 CGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQLCDRA 335
C K F L H HT+ RPF C +C K+F + RH + HTG K + C C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 336 FSQSNSLKGHIQS 374
F++ ++L H +S
Sbjct: 637 FARMDALNRHYKS 649
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 111 HKWSHSDEPKFKCETCGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRC 290
H +H++ F+C C K+F + H + HT ++ F+C C + F L RH +
Sbjct: 590 HMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Query: 291 HTGEKPYR 314
G+ R
Sbjct: 650 EVGQNCLR 657
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 58.0 bits (134), Expect = 1e-09
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +3
Query: 234 PVCPKAFLDKFGLERHLRCHTGEKPYRCQLCDRAFSQSNSLKGHIQSVHLKK 389
P CPK+F K L RH R H K + C C+RAF++S+ L H+Q +HL+K
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 132 EPKFKCE--TCGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLR 287
+P+F C C K+F L H R H +++ FSC C +AF L RH++
Sbjct: 23 DPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 90 RKSMLVYHKWSHSDEPKFKCETCGKAFQHPNGLYFH 197
RK L H+ +H + F C C +AF + L H
Sbjct: 39 RKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 219 RPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQL--CDRAFSQSNSLKGH 365
RP+ CP+C KAF RH+R HTGEKP+ C C + FS+S+ L H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 41.5 bits (93), Expect = 1e-04
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +3
Query: 129 DEPK-FKCETCGKAFQHPNGLYFHRRWHTDLRPFSC--PVCPKAFLDKFGLERHLRCHTG 299
D P+ +KC C KAF H R HT +P C P C K F L RH R HT
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Query: 300 EKPYR----CQLCDRAFSQSNSLKGHIQ 371
R + + SNS G+++
Sbjct: 81 ANSRRNAAAAAAANNSARSSNSPAGNLE 108
Score = 28.7 bits (61), Expect = 0.88
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 303 KPYRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
+PY+C LC +AF + HI++ +KP+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPH 54
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 52.4 bits (120), Expect = 6e-08
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +3
Query: 231 CPVCPKAFLDKFGLERHLRCHTGEKPYRCQL--CDRAFSQSNSLKGHIQSVH 380
CP +F L HLR HTGEKP+ C + CDR+F++S++L H+++VH
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 30.7 bits (66), Expect = 0.22
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = +3
Query: 135 PKFKCE--TC---GKAFQHPNGLYFHRRWHTDLRPFSC--PVCPKAFLDKFGLERHLR 287
PK+ CE C G L H R HT +PF C P C ++F L +H+R
Sbjct: 71 PKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 156 CGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQLCDRA 335
C K + H + H RP+ C +C F+ L+RHLR H +PY C+ C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 336 FSQSNSLKGHIQ 371
F++ ++L H Q
Sbjct: 509 FNRLDALNRHKQ 520
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 240 CPKAFLDKFGLERHLRCHTGEKPYRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
C K K+ +E H++ H ++PYRC LC F + + LK H++ +PY
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPY 501
Score = 35.9 bits (79), Expect = 0.006
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 90 RKSMLVYHKWSHSDEPKFKCETCGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFG 269
RK + H +H + ++C+ C F + L H R H + RP+ C C K F
Sbjct: 456 RKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDA 514
Query: 270 LERH 281
L RH
Sbjct: 515 LNRH 518
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.0 bits (114), Expect = 3e-07
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +3
Query: 216 LRPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQL--CDRAFSQSNSLKGHIQSVHLKK 389
++ + CP C + F + RH+R HTGEKP+ C C + F++ + L H+++ HL+K
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT-HLRK 59
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 141 FKCETCGKAFQHPNGLYFHRRWHTDLRPFSC--PVCPKAFLDKFGLERHLRCH 293
++C C + F H R HT +PF C P C K F + L RH+R H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 303 KPYRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
K Y C C R F + HI+S +KP+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPF 32
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 45.6 bits (103), Expect = 7e-06
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 219 RPFSCPVCPKAFLDKFGLERHLR-CHTGEKPYRCQLCDRAFSQSNSLKGH 365
+ F CP C K F L RH+R HT EKP+ C +C + FS+ ++L+ H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 141 FKCETCGKAFQHPNGLYFH-RRWHTDLRPFSCPVCPKAFLDKFGLERHLRCHTGEKP 308
F C C K F+ L H R HT +PF C +C K F + L +H R H P
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 297 GEKPYRCQLCDRAFSQSNSLKGHIQSVHL-KKPY 395
G K + C C + F +S L+ HI+S+H +KP+
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPF 452
Score = 29.1 bits (62), Expect = 0.67
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 HSDEPKFKCETCGKAFQHPNGLYFHRRWHTDLRP-FSCPVCPKAF 254
H+ E F C CGK F + L H R H + P +C P +
Sbjct: 446 HTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLACFFQPSGY 489
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +3
Query: 216 LRPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQL-------CDRAFSQSNSLKGHIQS 374
++ + C C +AF L+RH+R HT EKP+ C C R FS+ + L H Q
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 375 VH 380
+H
Sbjct: 127 IH 128
Score = 34.7 bits (76), Expect = 0.013
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 138 KFKCETCGKAFQHPNGLYFHRRWHTDLRPFSC 233
++ CETC +AF L H R HT+ +PF+C
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 33.1 bits (72), Expect = 0.041
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 303 KPYRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
K Y C+ C RAF++ LK HI+S +KP+
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPF 98
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 240 CPKAFLDKFGLERHLRCHTGEKPYRCQLCDRAFSQSNSLKGHIQSVHLKK 389
C K+F K RH R HT K + C C +F++S+ L H+ H+K+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQ 73
Score = 34.7 bits (76), Expect = 0.013
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 138 KFKCET--CGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHL 284
++KC+ C K+F H R HT+ + F CP C +F L RH+
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +3
Query: 219 RPFSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQLCDRAFSQSNSLKGHIQSVHLKK 389
R F C C K F L RH CH+ +P C C+ + + LK HIQ H K
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 141 FKCETCGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRCHTGEK 305
F C+ C K F L H+ H+ P CP C K L+RH++ +K
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 129 DEPKFKCET--CGKAFQHPNGLYFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRCHTGE 302
D+P +KC C KA+++ NGL +H+ H P + P F +E
Sbjct: 347 DKP-YKCPVPNCDKAYKNQNGLKYHKL-HGHCSPITTPTPAPIPHQGFVVEN-------- 396
Query: 303 KPYRCQLCDRAFSQSNSLKGHIQSVHLK 386
KPYRC++C + + N LK H HL+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRTHSHLQ 424
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 138 KFKCETCGKAFQHPNGLYFHRRWHTDLRPFSCPV--CPKAFLDKFGLERHLRCH 293
+++C C + F P+ L H HT RPF C C KAF + + RH R H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 225 FSCPVCPKAFLDKFGLERHLRCHTGEKPYRCQL--CDRAFSQSNSLKGHIQSVH 380
+ C C + F L+ H HTGE+P+ C C +AF+ ++++ H Q +H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH-QRIH 520
Score = 33.5 bits (73), Expect = 0.031
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 90 RKSMLVYHKWSHSDEPKFKCE--TCGKAFQHPNGLYFHRRWH 209
R S L H +SH+ E F C+ CGKAF + + H+R H
Sbjct: 479 RPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 309 YRCQLCDRAFSQSNSLKGHIQSVHLKKPY 395
YRC C + FS+ +SLK H S ++P+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPF 496
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 189 YFHRRWHTDLRPFSCPVCPKAFLDKFGLERHLRCH 293
Y W + C + P AF +F RH +CH
Sbjct: 1673 YHEADWLLPQQNEKCSIYPLAFSPRFTYYRHTKCH 1707
>SPBC1271.05c |||zinc finger protein zf-AN1 type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 548 TGAQRNCLPTLASFIIKLAGSATRCCG*GFC 640
T +R C PT ++LAG+ C G FC
Sbjct: 145 TSRRRCCHPTCTRITLRLAGNCLHCNG-RFC 174
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 682 QFLVLA*PAACHLETKTLATATCGRAC 602
Q L++ A H+ TL A CG+AC
Sbjct: 269 QALLIMIQFAAHVSLHTLCKALCGQAC 295
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
Frame = +3
Query: 231 CPVCPKAFLDKFGLERHLRCHTGEKPYRCQLCDRA--------FSQSNSLKGHIQSVH 380
C C F D L +H R EK RC +CD+ F +SL+ H + H
Sbjct: 247 CEFCNTHFYDDDELFKHCR----EKHERCYICDQVAGRPTHQYFKNYDSLERHFEKDH 300
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 167 VPASQRALFPPEMAHRPEAVLVPRL 241
+PA Q + FPP A P+ L+P L
Sbjct: 47 LPAPQVSTFPPTPAKTPKKQLLPNL 71
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,495,190
Number of Sequences: 5004
Number of extensions: 46304
Number of successful extensions: 165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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