Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22c12
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    366   e-101
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   366   e-101
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   366   e-101
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   358   4e-99
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   358   4e-99
AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p pro...    42   0.001
AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA...    42   0.001
L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    31   1.7  
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    31   1.7  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  366 bits (900), Expect = e-101
 Identities = 179/209 (85%), Positives = 193/209 (92%), Gaps = 1/209 (0%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA-WLLCTGAREAAFRNIKTIAECVAD 635
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA WLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 636 ELINAAKGSSNSYAIKKKDELERVAKSNR 722
           ELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 200 ELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  366 bits (900), Expect = e-101
 Identities = 179/209 (85%), Positives = 193/209 (92%), Gaps = 1/209 (0%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA-WLLCTGAREAAFRNIKTIAECVAD 635
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA WLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 636 ELINAAKGSSNSYAIKKKDELERVAKSNR 722
           ELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 200 ELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  366 bits (900), Expect = e-101
 Identities = 179/209 (85%), Positives = 193/209 (92%), Gaps = 1/209 (0%)
 Frame = +3

Query: 99  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 278
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 279 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 458
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 459 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA-WLLCTGAREAAFRNIKTIAECVAD 635
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA WLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 636 ELINAAKGSSNSYAIKKKDELERVAKSNR 722
           ELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 200 ELINAAKGSSNSYAIKKKDELERVAKSNR 228


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  358 bits (881), Expect = 4e-99
 Identities = 174/217 (80%), Positives = 192/217 (88%), Gaps = 1/217 (0%)
 Frame = +3

Query: 75  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 254
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 255 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 434
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 435 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA-WLLCTGAREAAFRNIK 611
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA WL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 612 TIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 722
           T+AEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  358 bits (881), Expect = 4e-99
 Identities = 174/217 (80%), Positives = 192/217 (88%), Gaps = 1/217 (0%)
 Frame = +3

Query: 75  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 254
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 255 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 434
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 435 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA-WLLCTGAREAAFRNIK 611
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA WL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 612 TIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 722
           T+AEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230


>AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p
           protein.
          Length = 218

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +3

Query: 432 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA--WLLCTGAREAAFRN 605
           NP  +L  A+ N  P    T I R G   +  V ++  R    A  WLL   ARE   R 
Sbjct: 117 NPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLL-EAAREKE-RK 174

Query: 606 IKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 722
           + ++ E +A E+++AA G      IK+KD+L R+ +SNR
Sbjct: 175 V-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210


>AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA
           protein.
          Length = 218

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +3

Query: 432 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQA--WLLCTGAREAAFRN 605
           NP  +L  A+ N  P    T I R G   +  V ++  R    A  WLL   ARE   R 
Sbjct: 117 NPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLL-EAAREKE-RK 174

Query: 606 IKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 722
           + ++ E +A E+++AA G      IK+KD+L R+ +SNR
Sbjct: 175 V-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210


>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 257 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 153
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 257 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 153
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,040,453
Number of Sequences: 53049
Number of extensions: 726821
Number of successful extensions: 1852
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)