Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22c08
(426 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 161 5e-40
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 161 5e-40
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 161 5e-40
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 149 2e-36
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 27 7.9
BT010092-1|AAQ22561.1| 470|Drosophila melanogaster LD01958p pro... 27 7.9
AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p pro... 27 7.9
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 27 7.9
AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA... 27 7.9
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 7.9
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 7.9
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 27 7.9
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 27 7.9
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 27 7.9
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 27 7.9
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 161 bits (390), Expect = 5e-40
Identities = 81/116 (69%), Positives = 86/116 (74%)
Frame = +2
Query: 17 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 196
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 197 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 364
VP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 161 bits (390), Expect = 5e-40
Identities = 81/116 (69%), Positives = 86/116 (74%)
Frame = +2
Query: 17 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 196
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 197 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 364
VP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 161 bits (390), Expect = 5e-40
Identities = 81/116 (69%), Positives = 86/116 (74%)
Frame = +2
Query: 17 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 196
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 197 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 364
VP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 149 bits (360), Expect = 2e-36
Identities = 76/112 (67%), Positives = 81/112 (72%)
Frame = +2
Query: 29 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQY 208
KDAK+SAKQPQ LNNQVLFDK TYEKLYKEVP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 209 KLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 364
KLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 KLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 112
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 282 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 163
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>BT010092-1|AAQ22561.1| 470|Drosophila melanogaster LD01958p
protein.
Length = 470
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 354 LVARV*ITCPWCWTTCLMRPFSLSSMSALLA 262
L+ + + C W W T ++ ++LS+ ++LA
Sbjct: 438 LIGIIYVGCDWVWVTFMLAAWALSAAPSMLA 468
>AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p
protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 321 CWTTCLMRPFSLSSMSALLAR 259
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 48 PNSLKKHRRRRKDPVAAKPRRRSGP 122
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA
protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 321 CWTTCLMRPFSLSSMSALLAR 259
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 165 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 76
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 165 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 76
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 48 PNSLKKHRRRRKDPVAAKPRRRSGP 122
P+S + R R+ P++ PRRRS P
Sbjct: 88 PHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 48 PNSLKKHRRRRKDPVAAKPRRRSGP 122
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 48 PNSLKKHRRRRKDPVAAKPRRRSGP 122
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 282 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 163
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,706,829
Number of Sequences: 53049
Number of extensions: 394648
Number of successful extensions: 1162
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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