Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22c06
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-P...    30   2.9  
AY113261-1|AAM29266.1|  199|Drosophila melanogaster AT15479p pro...    30   3.8  
AF097364-1|AAC71035.1|  530|Drosophila melanogaster Drongo protein.    30   3.8  
AE014297-232|AAN13279.1|  199|Drosophila melanogaster CG31542-PA...    30   3.8  
BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p pro...    29   5.1  
AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-P...    29   5.1  

>AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-PA
           protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +3

Query: 462 PVPSNRNTLSHSCTERHAHLFLPPAAT-----VSVEGGDACAPEYPGTASCKSA 608
           P PS+ NT SHS ++ +A+   PP  T      ++  G A A    GTA+  +A
Sbjct: 135 PNPSSHNTNSHSSSQANANANPPPNTTNNITAATLVAGAAAAAAATGTAATSTA 188


>AY113261-1|AAM29266.1|  199|Drosophila melanogaster AT15479p
           protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 740 TTSCVCEQIRQKAPPLSKFR*HLQCSNNP 654
           T  C C Q R + PP S    H+ CS  P
Sbjct: 81  TVECTCTQNRSRPPPPSVQADHITCSRGP 109


>AF097364-1|AAC71035.1|  530|Drosophila melanogaster Drongo protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = -3

Query: 739 QRPASVNKSDRRRLHCQSLDSTCNAPIILFVTPSIC*PALLHTPADLHDAVPGYSGAHAS 560
           QR   ++K +R+R + +      +    + +  S   PA  HT    H+   GY+  H +
Sbjct: 109 QRELMMDKYERKRYYLEPASPLKSLANAVNLKSSA--PATNHTQNGHHN---GYASIHLT 163

Query: 559 PPSTETVAAGGKNKCA 512
           PP+ +  +A G  K A
Sbjct: 164 PPAAQRTSANGLQKVA 179


>AE014297-232|AAN13279.1|  199|Drosophila melanogaster CG31542-PA
           protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 740 TTSCVCEQIRQKAPPLSKFR*HLQCSNNP 654
           T  C C Q R + PP S    H+ CS  P
Sbjct: 81  TVECTCTQNRSRPPPPSVQADHITCSRGP 109


>BT011553-1|AAS15689.1|  215|Drosophila melanogaster AT30947p
           protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 493 TLVPNATRTYFCLQ--QQRFPSKGVTHVHLSTLEQRHANRR 609
           +L P A  T +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 48  SLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


>AE014298-3057|AAF50877.3|  221|Drosophila melanogaster CG11233-PA
           protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 493 TLVPNATRTYFCLQ--QQRFPSKGVTHVHLSTLEQRHANRR 609
           +L P A  T +CL+  QQR  ++   H H   ++  H NRR
Sbjct: 48  SLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRR 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,134,547
Number of Sequences: 53049
Number of extensions: 725731
Number of successful extensions: 2445
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2445
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)