Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22c05
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       30   0.018
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   0.92 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.8  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.7  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   4.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   6.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 386 KSCGKSYKYCVTLRIELRR--EAPRVVVYTMNNP*VDI 279
           + C  + KYC +L+I LRR    P VV+    NP  DI
Sbjct: 290 RDCSYATKYCHSLKIHLRRYGHTPNVVLDEEGNPCPDI 327


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 386 KSCGKSYKYCVTLRIELRR 330
           + C  + KYC +L+I LRR
Sbjct: 48  RDCSYATKYCHSLKIHLRR 66


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 236 VFIHGIIIMFNICWFKIDFFSFLTS 162
           + +H I I     W  ID F  LTS
Sbjct: 89  ILVHAITIRSTFSWTFIDVFIMLTS 113


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 238 GTCYRTRIGEVRPQISTHGLFMVYTTTRGASRRNSIRSVTQYLYDLP 378
           GT   T +G V   +     F + TTT+GA+   ++    Q+L  LP
Sbjct: 354 GTLLHTIVGAVTVYLIMFIQFDIATTTKGAA--PAVSKARQFLPALP 398


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 238 GTCYRTRIGEVRPQISTHGLFMVYTTTRGASRRNSIRSVTQYLYDLP 378
           GT   T +G V   +     F + TTT+GA+   ++    Q+L  LP
Sbjct: 179 GTLLHTIVGAVTVYLIMFIQFDIATTTKGAA--PAVSKARQFLPALP 223


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 439 YFNTFTM*NRRNAGTVAENHVASHTNIASRCGLSCGGK 326
           YF    M + RN G V+  H   H +  +   +  GG+
Sbjct: 4   YFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGR 41


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 601 IEKRVKSNERCGNNCGCNSRIRNI 672
           I   +  +  CGN  GC  R R I
Sbjct: 363 ISPSINDDGTCGNGYGCEHRWRQI 386


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
           K F+  H    R    + H+LC T   +++W
Sbjct: 240 KEFHTNHYLTRRRRIEMAHALCLTERQIKIW 270


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 606 FNRTPPPDPLSTPSMLSTSFSIALGANPSTSAT 508
           +  +PPP P S  + +S+S   +  A P  + T
Sbjct: 7   YEESPPPAPQSAATPISSSGMTSPAAAPPPATT 39


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
           K F+  H    R    + H+LC T   +++W
Sbjct: 22  KEFHTNHYLTRRRRIEMAHALCLTERQIKIW 52


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 671 IFLIRLLHPQLLPHRSLDLTLFSIAHLHQILY 576
           +F++ +L   L  +R  D+TL  I     +LY
Sbjct: 56  LFIVVILKLILAKYRQQDVTLLQITKAKNLLY 87


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
           K F+  H    R    + H+LC T   +++W
Sbjct: 23  KEFHFNHYLTRRRRIEIAHALCLTERQIKIW 53


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
           K F+  H    R    + H+LC T   +++W
Sbjct: 174 KEFHFNHYLTRRRRIEIAHALCLTERQIKIW 204


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
           K F+  H    R    + H+LC T   +++W
Sbjct: 233 KEFHFNHYLTRRRRIEIAHALCLTERQIKIW 263


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 334 RNSIRSVTQYLYDLPHDFRPQFQ 402
           +N+ R V      +PHD+R +F+
Sbjct: 222 QNATRKVCGVWKRIPHDYRKRFR 244


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = +2

Query: 269 SGRK-YQLMGC--SWCTLLHVVLPAATQSAA*RNICMTCHMIFGHSSSITT 412
           SG K Y+ + C  S+    ++     T S      C  C   F  SSS+TT
Sbjct: 17  SGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTT 67


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = +2

Query: 269 SGRK-YQLMGC--SWCTLLHVVLPAATQSAA*RNICMTCHMIFGHSSSITT 412
           SG K Y+ + C  S+    ++     T S      C  C   F  SSS+TT
Sbjct: 273 SGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTT 323


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 257 LVR*HVPVFIHGIIIMFNICWFKI 186
           L+R    +F HG+++MF I +  +
Sbjct: 864 LIRLFNEIFGHGLLLMFGISFLLV 887


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,838
Number of Sequences: 336
Number of extensions: 4505
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)