Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22c05
(792 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.81
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.81
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.81
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.3
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 23 4.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.7
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 7.5
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 7.5
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 7.5
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.9
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 9.9
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 9.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 9.9
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 210 HNYYTVNKYRNVLSYQNWRSPAANIN 287
+NY N Y N +Y N++ NIN
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLYYNIN 114
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 704 GSKGMALIVWVLSGFLSMIGALCY 775
G + + I W L+G L+++ +CY
Sbjct: 198 GIENIGSIRWELAGTLAVVWIMCY 221
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 704 GSKGMALIVWVLSGFLSMIGALCY 775
G + + I W L+G L+++ +CY
Sbjct: 251 GIENIGSIRWELAGTLAVVWIMCY 274
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1
Query: 483 K*FYRTHTKKIRANFILTHSLCKTVVMLELW 391
K F+ H R + H+LC T +++W
Sbjct: 25 KEFHYNHYLTRRRRIEIAHALCLTERQIKIW 55
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 449 RIFLVCVR*NYFQKLLKMAKVADVDGLAPKAI--ENEVESIDGVDKGSGGGVRLKKE 613
RIF +CV Y ++ +M K + V G+ I + E I+ V K V + E
Sbjct: 32 RIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVVAVDPE 88
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 449 RIFLVCVR*NYFQKLLKMAKVADVDGLAPKAI--ENEVESIDGVDKGSGGGVRLKKE 613
RIF +CV Y ++ +M K + V G+ I + E I+ V K V + E
Sbjct: 32 RIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVVAVDPE 88
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 449 RIFLVCVR*NYFQKLLKMAKVADVDGLAPKAI--ENEVESIDGVDKGSGGGVRLKKE 613
RIF +CV Y ++ +M K + V G+ I + E I+ V K V + E
Sbjct: 32 RIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVVAVDPE 88
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 328 SRRNSIRSVTQYLYDLPHDFRPQFQHYDGF 417
+R RS YL D P D+ + DG+
Sbjct: 135 TRFQDSRSKDVYLIDYPEDYGKRVLSMDGY 164
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 328 SRRNSIRSVTQYLYDLPHDFRPQFQHYDGF 417
+R RS YL D P D+ + DG+
Sbjct: 135 TRFQDSRSKDVYLIDYPEDYGKRVLSMDGY 164
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 328 SRRNSIRSVTQYLYDLPHDFRPQFQHYDGF 417
+R RS YL D P D+ + DG+
Sbjct: 135 TRFQDSRSKDVYLIDYPEDYGKRVLSMDGY 164
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.9
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 201 YVKHNYYTVNKYRNVLSYQNWRSPAANINSWVVHGVHYYTWCFPPQ 338
Y NY N Y L Y+N+ NI V V Y FPP+
Sbjct: 89 YKYSNYNNYNNYNKKLYYKNY---IINIEQIPV-PVPIYCGNFPPR 130
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 281 ICGRTSPILVR*HVPVFIHGIIIMFNICW 195
I G + I R V + ++I+F ICW
Sbjct: 255 IHGDSRQIQSRKSVIKMLSAVVILFFICW 283
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 377 HMIFGHSSSITTVLHS 424
++ GH S+I +VLH+
Sbjct: 252 YLFSGHESNIASVLHA 267
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 377 HMIFGHSSSITTVLHS 424
++ GH S+I +VLH+
Sbjct: 267 YLFSGHESNIASVLHA 282
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 406 NAGTVAENHVASHTNIASRCGLSCGGKHH 320
N + +N +ASH N+ + + G HH
Sbjct: 389 NVLDLEDNALASHNNLLNNVYSTPGPHHH 417
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 725 IVWVLSGFLSMIGALCY 775
I W L+G L ++ LCY
Sbjct: 172 IRWELAGTLLLVWILCY 188
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,134
Number of Sequences: 438
Number of extensions: 5563
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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