Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22c02
(813 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1ZBT5 Cluster: Mediator of RNA polymerase II transcrip... 266 5e-70
UniRef50_Q96G25 Cluster: Mediator of RNA polymerase II transcrip... 181 2e-44
UniRef50_UPI0000E47D25 Cluster: PREDICTED: similar to MGC80409 p... 133 4e-30
UniRef50_Q4SRU6 Cluster: Chromosome undetermined SCAF14488, whol... 128 1e-28
UniRef50_A7T1N3 Cluster: Predicted protein; n=2; Nematostella ve... 113 5e-24
UniRef50_Q9U1W2 Cluster: Mediator of RNA polymerase II transcrip... 88 2e-16
UniRef50_Q86E25 Cluster: Clone ZZZ31 mRNA sequence; n=1; Schisto... 87 5e-16
UniRef50_A2FUV0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.70
UniRef50_A3LN10 Cluster: Predicted protein; n=7; Saccharomycetal... 35 2.1
UniRef50_Q6C314 Cluster: Yarrowia lipolytica chromosome F of str... 34 4.9
UniRef50_Q0U944 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 4.9
UniRef50_Q2G6P6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q22258 Cluster: Serine/threonine-protein kinase ATR; n=... 33 8.6
>UniRef50_A1ZBT5 Cluster: Mediator of RNA polymerase II
transcription subunit 8; n=8; Endopterygota|Rep:
Mediator of RNA polymerase II transcription subunit 8 -
Drosophila melanogaster (Fruit fly)
Length = 252
Score = 266 bits (652), Expect = 5e-70
Identities = 131/249 (52%), Positives = 169/249 (67%), Gaps = 5/249 (2%)
Frame = +3
Query: 81 QREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSK 260
QR+EK E T+ +L R+NDLK A+ ++I KLE EYETINWPTFLDN+AI+S HLTGL+K
Sbjct: 2 QRDEKLFELTLDTVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFAIISSHLTGLTK 61
Query: 261 ILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRL 440
IL EQ LR+R VLPL +S +RD+TL ++TEGRVP +HD+VPD LRT+P+P EQ++
Sbjct: 62 ILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPDYLRTRPDPITEQKM 121
Query: 441 QQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTH 620
Q KA+ L+ D A K + Q+ KVVSHV +++SK RE+WE ES TG+Q T ++ADT
Sbjct: 122 LQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADTQ 181
Query: 621 ALVTAVGTGKGLR-----PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLPKAPSAIKTNI 785
LV AVG GKGL+ PG MV G L KAPSA+KTNI
Sbjct: 182 LLVAAVGMGKGLKLTNYGPGPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTNI 241
Query: 786 KAANXIHPY 812
K+AN +HP+
Sbjct: 242 KSANQVHPF 250
>UniRef50_Q96G25 Cluster: Mediator of RNA polymerase II
transcription subunit 8; n=45; Euteleostomi|Rep:
Mediator of RNA polymerase II transcription subunit 8 -
Homo sapiens (Human)
Length = 268
Score = 181 bits (441), Expect = 2e-44
Identities = 111/268 (41%), Positives = 154/268 (57%), Gaps = 24/268 (8%)
Frame = +3
Query: 81 QREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSK 260
QREEKQLEA++ A+L++V DLK ++ + I KLE EY + WP+ LD++A+LSG L L+K
Sbjct: 2 QREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNK 61
Query: 261 ILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRL 440
+L+ E+ R+++++PL LS +RDE L TEGRVP +H++VPD LRTKP+P+ E++
Sbjct: 62 VLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQE 121
Query: 441 QQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTH 620
+Q A+ + D AQK I K+ S++ E ISK E+ E ES + T N DT+
Sbjct: 122 KQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISK--EERESESGGLRPNKQTFNPTDTN 179
Query: 621 ALVTAVGTGKGLR---------PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLP------ 755
ALV AV GKGL PG A G Q+ APS
Sbjct: 180 ALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSGV 239
Query: 756 ---------KAPSAIKTNIKAANXIHPY 812
K PS IKTNIK+A+ +HPY
Sbjct: 240 QMAQAGQPGKMPSGIKTNIKSAS-MHPY 266
>UniRef50_UPI0000E47D25 Cluster: PREDICTED: similar to MGC80409
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC80409 protein -
Strongylocentrotus purpuratus
Length = 150
Score = 133 bits (322), Expect = 4e-30
Identities = 63/146 (43%), Positives = 102/146 (69%)
Frame = +3
Query: 81 QREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSK 260
Q ++K L+ ++ IL+RVNDLK A+ L+ KLE +ET+NWP+ L+++A+LSG + L++
Sbjct: 2 QNQDKVLDNSLDYILSRVNDLKKALTDLLMKLEHHHETLNWPSVLNSFALLSGQINTLNR 61
Query: 261 ILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRL 440
L++++ L++ I+LPL+LS +RDE L +TEGRV + HD+VP+ LRTKPEP++E+R
Sbjct: 62 HLKSDKTPVLKNLIILPLKLSQDRDEELEKVTEGRVASFNHDVVPNYLRTKPEPESEERE 121
Query: 441 QQFNHKASTLSYDTAQKHIAQFTKVV 518
Q A+ LS + A+ Q ++
Sbjct: 122 QVLAKDAAQLSPEVAKSSYKQINTII 147
>UniRef50_Q4SRU6 Cluster: Chromosome undetermined SCAF14488, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14488, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 324
Score = 128 bits (310), Expect = 1e-28
Identities = 62/147 (42%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +3
Query: 84 REEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLSKI 263
REEKQLE ++ ++++RV +K A+ + I KLE EYE + WP+ LDN+A+LSG L ++K+
Sbjct: 1 REEKQLETSVESLISRVAHVKAALHSFIYKLENEYERLMWPSVLDNFALLSGQLNTINKL 60
Query: 264 LQAEQAASLRSRIVLPLQLSCERDETLA------------HLTEGRVPACTHDLVPDLLR 407
L+ E+ S R+++++PL LS +RDE LA LTE R+P +H++VPD LR
Sbjct: 61 LRNEKTPSFRNQVIIPLLLSPDRDEDLAVKVFTILVTLPQKLTEQRLPVFSHEIVPDYLR 120
Query: 408 TKPEPQAEQRLQQFNHKASTLSYDTAQ 488
TKP+P+ E++ +Q + +A+ + + AQ
Sbjct: 121 TKPDPEVEEQEKQLSAEAARMGVEVAQ 147
Score = 40.7 bits (91), Expect = 0.043
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Frame = +3
Query: 486 QKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVGTGKGL--- 656
QK I KV S + E ++ RE+ + ES+ + N ADT+ LV AV G+GL
Sbjct: 195 QKQIQALNKVCSGLLEKLNNPREERDAESISLRQNKQYFNPADTNTLVGAVAFGRGLSKC 254
Query: 657 ---------RPGMANMVGQXXXXXXXXXXXXXQLGPAPSTLP-------KAPSAIKTNIK 788
PG M+G + A S +P K S+IKTNIK
Sbjct: 255 RPAGPVAPGHPGPGTMMG-GGTALQQAAIGGGAVQQAGSVVPQQQGQQGKMASSIKTNIK 313
Query: 789 -AANXIHPY 812
A++ +HPY
Sbjct: 314 SASSSMHPY 322
>UniRef50_A7T1N3 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 113 bits (272), Expect = 5e-24
Identities = 83/260 (31%), Positives = 129/260 (49%), Gaps = 12/260 (4%)
Frame = +3
Query: 69 MNMQQREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILS--GH 242
M MQQ EEK +E ++ AI +RV +++ ++ + KLE E +NWP+ LDN+A+LS H
Sbjct: 1 MRMQQ-EEKLIETSLEAITSRVQEVRDSVHTFLAKLERE--PLNWPSVLDNFALLSVPDH 57
Query: 243 LTGL--SKILQAEQAASLRSRIVLPLQLSCE---RDETLAHLTEGRVPACT-----HDLV 392
L ++ +AEQ+ + S + + +E L LT+ A + V
Sbjct: 58 LRTKYEPEVEEAEQSLVVASASITQENAQKQINHLNELLTTLTDMITSAKEDWEGEQNSV 117
Query: 393 PDLLRTKPEPQAEQRLQQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGES 572
PD LRTK EP+ E+ Q +++++ + AQK I ++++ + +II+ +EDWEGE
Sbjct: 118 PDHLRTKYEPEVEEAEQSLVVASASITQENAQKQINHLNELLTTLTDIITSAKEDWEGE- 176
Query: 573 MRSTGMQPTHNIADTHALVTAVGTGKGLRPGMANMVGQXXXXXXXXXXXXXQLGPAPSTL 752
S + D ALV AV GKGL+P + +
Sbjct: 177 QNSASRSTSSTNPDIGALVAAVTFGKGLKPNKTTNSSKTRTSTSSEQGSAQWMNNKADQP 236
Query: 753 PKAPSAIKTNIKAANXIHPY 812
K PS+IKT +KAA HPY
Sbjct: 237 GKHPSSIKTELKAAASPHPY 256
>UniRef50_Q9U1W2 Cluster: Mediator of RNA polymerase II
transcription subunit 8; n=3; Caenorhabditis|Rep:
Mediator of RNA polymerase II transcription subunit 8 -
Caenorhabditis elegans
Length = 297
Score = 88.2 bits (209), Expect = 2e-16
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Frame = +3
Query: 57 PFTTMNMQQREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILS 236
P T N Q EK +AT + I RV D K I+ L+ L+ + E WP L+ ++ L+
Sbjct: 8 PPVTSNYQGEPEKIAQATDMMI-KRVTDAKKIIEELLQMLDLQ-EKCPWPLMLEKFSTLA 65
Query: 237 GHLTGLSKILQA--------EQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLV 392
++ L ++ + LRS +++ +L E DETL T+GRV + H LV
Sbjct: 66 SFMSSLQSSVRKSGMPHGHEDYGQFLRSHVLVTQRLQYEPDETLQRATQGRVMSWNHALV 125
Query: 393 PDLLRTKPEPQAEQRLQQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGES 572
P+ LRTKP P+ E + + S S D + IA + K + E + +
Sbjct: 126 PEYLRTKPNPEMENEEGMLDGERSAKSADLVVRQIAAYNKNI----EGLINHLNSVDRMH 181
Query: 573 MRSTGMQPTHNIADTHALVTAVGTGKGLR 659
+ +PT+N +T +V ++ TG+G+R
Sbjct: 182 TEAAIEKPTYNRDETAKIVKSILTGEGIR 210
>UniRef50_Q86E25 Cluster: Clone ZZZ31 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZZ31 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 197
Score = 87.0 bits (206), Expect = 5e-16
Identities = 56/194 (28%), Positives = 96/194 (49%)
Frame = +3
Query: 75 MQQREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGL 254
MQ E++QLE I + V LK IQ L+ K ET+ + +WP +L A+ + L +
Sbjct: 1 MQIAEKRQLE-NINILYTAVYKLKQKIQDLVIKFETQGDQCDWPRYLSTLALCASELGEI 59
Query: 255 SKILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQ 434
KIL++++ ++ + ++ P+ L+ E D LA +TE R+ HD VP LRTK +P+ E
Sbjct: 60 RKILESDRFSNEHTLVLTPIVLNPEHDANLAKITEERLSLFNHDTVPQYLRTKLDPKVES 119
Query: 435 RLQQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIAD 614
+A+++ D K I + + + I+ ++D E + + N D
Sbjct: 120 ECSSQATRAASIPSDQVNKLINLSNRAIDCSLKEINLLKQDLEAD-FSDRQNKIASNPDD 178
Query: 615 THALVTAVGTGKGL 656
L+ + KGL
Sbjct: 179 LVTLMNFISRKKGL 192
>UniRef50_A2FUV0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 358
Score = 36.7 bits (81), Expect = 0.70
Identities = 31/125 (24%), Positives = 54/125 (43%)
Frame = +3
Query: 78 QQREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHLTGLS 257
Q+RE Q+ + L R D+K A A N ++T+ I +DN ++LS ++
Sbjct: 240 QERELTQMRQKLQETLKRAADVKKASDASSNNMKTQLNAI----LIDNQSLLSSVPKSIA 295
Query: 258 KILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQR 437
QA+ L+ QL +R++ L E R L +L R + E + +
Sbjct: 296 VETQAQTNTELQDETRKLEQLFQKREQDENRLAEARTR--NESLKRELARLRHELRVRRH 353
Query: 438 LQQFN 452
+ +N
Sbjct: 354 REAYN 358
>UniRef50_A3LN10 Cluster: Predicted protein; n=7;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 355
Score = 35.1 bits (77), Expect = 2.1
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +3
Query: 30 N*KVTIVYLPFTTMNMQQREEKQLEATIVAILNRVNDLKTAIQALINKLETEYETINWPT 209
N K T+V LP + + + A I+ N +N+ +Q LIN ++TE T +
Sbjct: 97 NVKCTVV-LPVISKVAVREKLISYGADIILFGNNINEADQHLQNLINSIDTEKTTAIYCH 155
Query: 210 FLDNYAILSGHLTGLSKILQAEQAASLR 293
+N I GH T + +++Q A ++
Sbjct: 156 PFNNPLIWQGHATLVDEVVQEVSKAEVK 183
>UniRef50_Q6C314 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=5; Ascomycota|Rep:
Yarrowia lipolytica chromosome F of strain CLIB122 of
Yarrowia lipolytica - Yarrowia lipolytica (Candida
lipolytica)
Length = 923
Score = 33.9 bits (74), Expect = 4.9
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +3
Query: 102 EATIVAILNRVNDLKTAIQALINKLE-TEYETINWPTFLDNYAI-LSGH-LTGLSKILQA 272
EA A L+ L+ A+Q LI++L T E+ + T + + L G LTG I+Q
Sbjct: 830 EAVDTATLSEYKGLEEAVQFLISQLSLTPLESSDEVTSASTHTLKLFGKTLTGEKVIVQI 889
Query: 273 EQAASLRSRIVLPLQLSCERDETLAHLTEGRV 368
+ AAS R+ +V+ + + DE +A L G V
Sbjct: 890 KMAASQRTGVVVQCK-ARSGDEEVAELVAGFV 920
>UniRef50_Q0U944 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 270
Score = 33.9 bits (74), Expect = 4.9
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Frame = +3
Query: 165 INKLETEYETI-NWPTFLD--NYAILSGHLTGLSKILQAEQAASLRSRIVLPLQLSCERD 335
+ L +E +++ +WP Y +G L LSK + S LP + C
Sbjct: 88 LQNLGSEPQSLPSWPDLQTPATYTQRNGSLAILSKEGKEGNEQHELSNQALPSR--CTSL 145
Query: 336 ETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRLQQFNHKASTLSYDTAQKHIAQ 503
E+ H+T+ P +H L RT E + R+QQ + K T S +K + Q
Sbjct: 146 ESQDHITQAVTPRGSHPLATSQTRTYDETPSHSRMQQTSRKHVTASTAYRRKALPQ 201
>UniRef50_Q2G6P6 Cluster: Putative uncharacterized protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep: Putative
uncharacterized protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 864
Score = 33.1 bits (72), Expect = 8.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 276 QAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTH 383
QAAS R R+ LQ E LAHL EGR H
Sbjct: 274 QAASFRERVEASLQAFTASAEDLAHLAEGRFETLAH 309
>UniRef50_Q22258 Cluster: Serine/threonine-protein kinase ATR; n=3;
Caenorhabditis|Rep: Serine/threonine-protein kinase ATR -
Caenorhabditis elegans
Length = 2531
Score = 33.1 bits (72), Expect = 8.6
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 129 RVNDLKTAIQALINKLETEYETINWPTFLDNYAILSGHL 245
+++DL+ I+++ +++T E I W F YA+L+ H+
Sbjct: 1993 QISDLRQNIKSMNREIQTALEHIGWRAFYPAYAVLARHI 2031
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,826,964
Number of Sequences: 1657284
Number of extensions: 12619095
Number of successful extensions: 35952
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35939
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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