Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22c01
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003357-1|AAH03357.2|  218|Homo sapiens HDDC2 protein protein.       176   8e-44
AF529363-1|AAQ09597.1|  204|Homo sapiens NS5ATP2 protein.             176   8e-44
BC066332-1|AAH66332.1|  204|Homo sapiens HD domain containing 2 ...   174   2e-43
AF151888-1|AAD34125.1|  170|Homo sapiens CGI-130 protein protein.      84   6e-16
AL121938-2|CAI19646.1|  170|Homo sapiens HD domain containing 2 ...    83   8e-16
BC001671-1|AAH01671.1|   71|Homo sapiens HDDC2 protein protein.        54   7e-07

>BC003357-1|AAH03357.2|  218|Homo sapiens HDDC2 protein protein.
          Length = 218

 Score =  176 bits (428), Expect = 8e-44
 Identities = 83/168 (49%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQ 427
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++    +L++ +C++
Sbjct: 31  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD----RLNKDRCVR 86

Query: 428 IALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQS 604
           +AL+HD+AECIVGD+ P   +  EEKHRRE+EAMK I+ L        +YEL++EYE QS
Sbjct: 87  LALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWEEYETQS 146

Query: 605 SPEAKFAKDLDRYEMILQAFEYEKRENTPKKCQEFFTATEGKFDHPFI 748
           S EAKF K LD+ EMILQA EYE  E+ P + Q+F+ +T GKF+HP I
Sbjct: 147 SAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEI 194


>AF529363-1|AAQ09597.1|  204|Homo sapiens NS5ATP2 protein.
          Length = 204

 Score =  176 bits (428), Expect = 8e-44
 Identities = 83/168 (49%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQ 427
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++    +L++ +C++
Sbjct: 17  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD----RLNKDRCVR 72

Query: 428 IALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQS 604
           +AL+HD+AECIVGD+ P   +  EEKHRRE+EAMK I+ L        +YEL++EYE QS
Sbjct: 73  LALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWEEYETQS 132

Query: 605 SPEAKFAKDLDRYEMILQAFEYEKRENTPKKCQEFFTATEGKFDHPFI 748
           S EAKF K LD+ EMILQA EYE  E+ P + Q+F+ +T GKF+HP I
Sbjct: 133 SAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEI 180


>BC066332-1|AAH66332.1|  204|Homo sapiens HD domain containing 2
           protein.
          Length = 204

 Score =  174 bits (424), Expect = 2e-43
 Identities = 82/168 (48%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQ 427
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++    +L++ +C++
Sbjct: 17  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD----RLNKDRCVR 72

Query: 428 IALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQS 604
           +AL+HD+AECIVGD+ P   +  EEKHRRE+EAMK I+ L        +YEL++EYE +S
Sbjct: 73  LALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWEEYETRS 132

Query: 605 SPEAKFAKDLDRYEMILQAFEYEKRENTPKKCQEFFTATEGKFDHPFI 748
           S EAKF K LD+ EMILQA EYE  E+ P + Q+F+ +T GKF+HP I
Sbjct: 133 SAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEI 180


>AF151888-1|AAD34125.1|  170|Homo sapiens CGI-130 protein protein.
          Length = 170

 Score = 83.8 bits (198), Expect = 6e-16
 Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +2

Query: 488 VSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQSSPEAKFAKDLDRYEMILQAF 664
           V  +++  ++ EAMK I+ L        +YEL++EYE QSS EAKF K LD+ EMILQA 
Sbjct: 59  VIKDDRLNKDPEAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQAS 118

Query: 665 EYEKRENTPKKCQEFFTATEGKFDHPFI 748
           EYE  E+ P + Q+F+ +T GKF+HP I
Sbjct: 119 EYEDLEHKPGRLQDFYDSTAGKFNHPEI 146



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQ 427
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++      + +K + 
Sbjct: 17  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDPEAMKQIT 76

Query: 428 IALIHDL 448
             L  DL
Sbjct: 77  QLLPEDL 83


>AL121938-2|CAI19646.1|  170|Homo sapiens HD domain containing 2
           protein.
          Length = 170

 Score = 83.4 bits (197), Expect = 8e-16
 Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +2

Query: 488 VSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQSSPEAKFAKDLDRYEMILQAF 664
           V  +++  ++ EAMK I+ L        +YEL++EYE QSS EAKF K LD+ EMILQA 
Sbjct: 59  VIKDDRLNKDREAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQAS 118

Query: 665 EYEKRENTPKKCQEFFTATEGKFDHPFI 748
           EYE  E+ P + Q+F+ +T GKF+HP I
Sbjct: 119 EYEDLEHKPGRLQDFYDSTAGKFNHPEI 146



 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKCLQ 427
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++      + +K + 
Sbjct: 17  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDREAMKQIT 76

Query: 428 IALIHDL 448
             L  DL
Sbjct: 77  QLLPEDL 83


>BC001671-1|AAH01671.1|   71|Homo sapiens HDDC2 protein protein.
          Length = 71

 Score = 53.6 bits (123), Expect = 7e-07
 Identities = 20/47 (42%), Positives = 34/47 (72%)
 Frame = +2

Query: 248 ILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 388
           +L+FL LVG+LK V RTGW+  ++   E+++ HMYRM +M  ++ ++
Sbjct: 17  LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,992,518
Number of Sequences: 237096
Number of extensions: 2030258
Number of successful extensions: 8021
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8012
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)