Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22c01
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64845-1|AAC48030.2|   75|Caenorhabditis elegans Hypothetical pr...    48   5e-06
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    32   0.50 
U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical pr...    31   0.88 
U41104-6|AAK77633.2|  419|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z29095-10|CAA82356.3|  163|Caenorhabditis elegans Hypothetical p...    28   6.2  
AF039710-5|AAB96689.2|  394|Caenorhabditis elegans Hypothetical ...    28   6.2  
U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AC084197-21|ABN43081.1|  172|Caenorhabditis elegans Hypothetical...    28   8.2  

>U64845-1|AAC48030.2|   75|Caenorhabditis elegans Hypothetical
           protein F45F2.9 protein.
          Length = 75

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = +2

Query: 578 LYKEYEDQSSPEAKFAKDLDRYEMILQAFEYEKRENTPKKCQEFFTATEG 727
           L+KEYE+ SS  A+  K LD+++MI+QA +YEK        Q+FFT+T G
Sbjct: 2   LWKEYEEASSLTARVVKHLDKFDMIVQADKYEKTHEI--DLQQFFTSTVG 49


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical protein
            C09G5.6 protein.
          Length = 948

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +2

Query: 476  PHCGVSPEEKHRR-EDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKFAKDLDRYEMI 652
            P    +P E  R   +EAM  +       GD+  +   EYED S PE    + ++++   
Sbjct: 794  PKSEENPRETGRTYSEEAMPPVQQTEKYNGDKRKKNQPEYEDISKPEEDKERAMEKHHKK 853

Query: 653  LQAFEYEKRENTPKKCQEFFTATE 724
               F+ EK+    +K QE   + E
Sbjct: 854  PNKFQ-EKQWEEHRKSQELRNSRE 876


>U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical
           protein C03B1.7 protein.
          Length = 818

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 479 HCGVSPEEKHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKFAKDLDRYEMI 652
           H    P EK  + ++  + ISG++     + YE  K +ED+S P+A+ A    + E I
Sbjct: 149 HVSGKPAEKKEQRNDMDRNISGVSV----KDYETLKNFEDKSPPQAENASSSKKDEPI 202


>U41104-6|AAK77633.2|  419|Caenorhabditis elegans Hypothetical
           protein T12C9.7 protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 485 GVSPEEKHRREDEAMKTISGLTGIAGDRMYELYKEY 592
           G + +++  RE E M T+  L  +AGD  +++Y+EY
Sbjct: 358 GKNVKDEWDREREVMLTLIDLFLVAGDENHDIYREY 393


>Z29095-10|CAA82356.3|  163|Caenorhabditis elegans Hypothetical
           protein R10E11.9 protein.
          Length = 163

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 461 VGDLTPHCGVSPEEKHRREDEAMKTISGLTGIAGDRMYELYKEYED 598
           VG       + PE+K  ++D  ++TIS  T I     +EL + YE+
Sbjct: 98  VGRKKKSSNIEPEKKPTKKDSQIQTISSST-IDSGTQWELRRSYEE 142


>AF039710-5|AAB96689.2|  394|Caenorhabditis elegans Hypothetical
           protein C46E10.4 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 497 EEKHRRED-EAMKTISGLTGIA-GDRMYELYKEYEDQSSPEAKFAKDLDRY 643
           EE ++RED E ++       I  G+  YE+ + +  + +PE  F K  D Y
Sbjct: 116 EEHYQREDDERLRAQQNQVHIRYGETQYEVRRNFGQRRNPEEAFIKLFDAY 166


>U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical
           protein F53B3.1 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 353 CTCGRLLSHNH*YHRGSNPFF 291
           CT  RLL+H   +HRG+N  F
Sbjct: 393 CTDNRLLNHRKKFHRGANSGF 413


>AC084197-21|ABN43081.1|  172|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.47 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +3

Query: 645 R*SYKHLSTKNVKILQRNVKSSLLQQR 725
           R +++H+S +NV+ + RNV+   +Q+R
Sbjct: 107 RVNFQHMSCQNVRTMSRNVQLGYVQER 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,839,542
Number of Sequences: 27780
Number of extensions: 352513
Number of successful extensions: 951
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)