Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22b23
         (426 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128517-1|BAC87476.1|  901|Homo sapiens protein ( Homo sapiens ...    33   0.53 
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.     33   0.53 

>AK128517-1|BAC87476.1|  901|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46675 fis, clone TRACH3009701, weakly  similar
           to Homo sapiens dynein, axonemal, heavy polypeptide 9
           (DNAH9). ).
          Length = 901

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 86  AYW---TDMHKKLRCHGIKSPFQQGIQRWHVWHVCVYP 190
           AYW   T++ K    HG+ + F+Q  + WH+W+    P
Sbjct: 671 AYWDNITELDKLTNFHGLMNSFEQYPRDWHLWYTNAAP 708


>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
          Length = 4464

 Score = 32.7 bits (71), Expect = 0.53
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 86   AYW---TDMHKKLRCHGIKSPFQQGIQRWHVWHVCVYP 190
            AYW   T++ K    HG+ + F+Q  + WH+W+    P
Sbjct: 3770 AYWDNITELDKLTNFHGLMNSFEQYPRDWHLWYTNAAP 3807


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,369,775
Number of Sequences: 237096
Number of extensions: 964298
Number of successful extensions: 1629
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)