Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22b20
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 286 2e-78
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 274 1e-74
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 273 2e-74
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 241 1e-64
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 211 1e-55
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 120 3e-28
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 106 4e-24
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 71 3e-13
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 25 9.4
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 9.4
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 286 bits (702), Expect = 2e-78
Identities = 136/181 (75%), Positives = 157/181 (86%)
Frame = +3
Query: 246 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 425
GTVIGIDLGTTYSCV V KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSN 93
Query: 426 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 605
PENT+FD KRLIGR++ ++T+ D+K FPF +V ++P V+V K F PEEISAM
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 606 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIA 785
+L+KMK+TAEAYLGK VTHAVVTVPAYFNDAQRQATKDAGTI+GLNV+RI+NEPTAAAIA
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIA 213
Query: 786 Y 788
Y
Sbjct: 214 Y 214
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 274 bits (671), Expect = 1e-74
Identities = 134/178 (75%), Positives = 150/178 (84%)
Frame = +3
Query: 255 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 434
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 435 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 614
T+FDAKRLIGR++ D VQ D+K +PFKV+ K+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 615 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAY 788
KM+ETAEAYLG KVT AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAY
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAY 181
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 273 bits (670), Expect = 2e-74
Identities = 133/178 (74%), Positives = 151/178 (84%)
Frame = +3
Query: 255 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 434
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 435 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 614
T+FDAKRLIGR ++D VQ D+K +PFKV+EK+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 615 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAY 788
KM+E+AEA+LG KVT AVVTVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAY
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAY 181
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 241 bits (589), Expect = 1e-64
Identities = 118/178 (66%), Positives = 138/178 (77%)
Frame = +3
Query: 255 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 434
IGIDLGTTYSCV V++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP N
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRN 67
Query: 435 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 614
TVFDAKRLIGR + D Q D+K +PFKV++ N P ++V K F +EISAMVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 615 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAY 788
KMKE +EA L K+V AV+TVPAYF+D+QR ATKDAG I+GLNV+RIINEPTAAAIAY
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAY 185
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 211 bits (515), Expect = 1e-55
Identities = 103/181 (56%), Positives = 135/181 (74%)
Frame = +3
Query: 246 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 425
G VIGIDLGTT SC+ + + ++IAN +G R TPS VAFT+DGERL+G +AK Q N
Sbjct: 50 GPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVIN 109
Query: 426 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 605
PENT F KRLIGR + + VQ D+K P+K+VE +S ++ ++G K ++P +I
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVE-HSNGDAWLE-ARG-KTYSPSQIGGF 166
Query: 606 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIA 785
+L+KM+ETA YLGK V +AVVTVPAYFND+QRQATK AG I+GLNV+R++NEPTAAA+A
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALA 226
Query: 786 Y 788
Y
Sbjct: 227 Y 227
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 120 bits (288), Expect = 3e-28
Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 1/180 (0%)
Frame = +3
Query: 252 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 431
V+GID G + + + V +N +++I N+ NR TPS V++ + R +G+AAK+ +N
Sbjct: 7 VVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERS-RFLGEAAKSAEASNFR 65
Query: 432 NTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMV 608
NTV KRL GR + D ++ + F K+ E + +VQ + F+ ++ A
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 609 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAY 788
TK+K AEA L V+ V+++PA+F D QR+A +A I+GLN +R++N+ AAA+ Y
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTY 185
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 106 bits (254), Expect = 4e-24
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Frame = +3
Query: 249 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 428
TVIGI G S + ++G+ +++AN++GNR PS +++ D E G A+ QL N
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 429 ENTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEK-NSKPHVQV--QTSQGDKVFAPEEI 596
+N+V + + L+G+ + T+ H P V + K VQ ++ +K+ E
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEA 143
Query: 597 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAA 776
S L ++ E+AE +LG KV V++VP YF DAQR+A + A +GL V+++I++P A
Sbjct: 144 SVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAV 203
Query: 777 AIA 785
+A
Sbjct: 204 ILA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 70.5 bits (165), Expect = 3e-13
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +3
Query: 249 TVIGIDLGTTYSCVGVYKNG-RVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 425
+V+ ID GT ++ + K G +EI+ R S VAF + ER+ G A N T
Sbjct: 23 SVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAF-KGNERIFGVDASNLATRF 81
Query: 426 PENTVFDAKRLIGREWSDQT-VQHDVKFFPFKVVEKNSKPHVQVQTSQGDKV-FAPEEIS 599
P +++ + K L+ + VQ +P + +N + + D+ ++ EEI
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 600 AMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAA 779
AM + AE +K+T V+TVP +FN+ QR +A I +V+ +I++ A A
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVA 201
Query: 780 IAY 788
I Y
Sbjct: 202 IEY 204
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 722 SIFGCLTLSIIEISRHSNNSMSNLFSKVSLSSLLHFSQNHS 600
+I G + L+ I ++N +N+F L+ L HF + S
Sbjct: 2586 NILGRIALAFTSIDENANLESANIFEHARLALLQHFMDHSS 2626
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 378 GERLIGDAAKNQLTTNPENT 437
GE ++ D+ N TNP+NT
Sbjct: 6 GENIVSDSIVNMELTNPDNT 25
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 370 VKATYEGVMRFPWS 329
+K TYEG +R PWS
Sbjct: 284 MKLTYEGELRAPWS 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,034,988
Number of Sequences: 5004
Number of extensions: 60745
Number of successful extensions: 190
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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