Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22b18
         (307 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106036-1|AAI06037.1|   87|Homo sapiens coiled-coil-helix-coile...    61   7e-10
AF242180-1|AAF60345.1|   96|Homo sapiens E2IG2 protein.                61   7e-10
BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.     29   2.0  
BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.     29   2.0  
BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open readi...    29   2.0  
AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open readi...    29   2.0  
BC107734-1|AAI07735.1|  202|Homo sapiens WHSC1L1 protein protein.      28   6.1  

>BC106036-1|AAI06037.1|   87|Homo sapiens
           coiled-coil-helix-coiled-coil-helix domain containing 8
           protein.
          Length = 87

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = +1

Query: 103 DDDPVEGMLKKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINK---HKQEETTKNK 273
           ++DP++ ++ ++GC   H+ VQEC+A+ +DWR+CQ  V  F+DC+++    +QEE  + +
Sbjct: 21  EEDPLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 80


>AF242180-1|AAF60345.1|   96|Homo sapiens E2IG2 protein.
          Length = 96

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = +1

Query: 103 DDDPVEGMLKKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINK---HKQEETTKNK 273
           ++DP++ ++ ++GC   H+ VQEC+A+ +DWR+CQ  V  F+DC+++    +QEE  + +
Sbjct: 30  EEDPLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 89


>BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 190 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 56
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 156 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 200


>BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 190 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 56
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


>BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 190 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 56
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


>AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 190 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 56
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


>BC107734-1|AAI07735.1|  202|Homo sapiens WHSC1L1 protein protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 130 KKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINKHKQEETTKNKH*IMIRSKKKK 306
           KKTG  E+  K+ + I   ++  +         D +N+ +  E TK+KH    + KKKK
Sbjct: 146 KKTGSPEIKLKITKTIQNGRELFESSLC----GDLLNEVQASEHTKSKHESKKKKKKKK 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,870,797
Number of Sequences: 237096
Number of extensions: 753449
Number of successful extensions: 1390
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)